Basic Information
Locus ID:
gene-LOC103700845
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Ubiquitin-conjugating enzyme E2, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 20388859 | 20400410 | - | gene-LOC103700845 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 27,155.34 Da | 53.70 | 72.10 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 64 | 197 | 2.00963E-51 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 66 | 196 | 3.1E-39 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 58 | 203 | 6.33E-46 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 48 | 212 | 1.2E-50 | IPR016135 |
| SMART | SM00212 | ubc_7 | 58 | 202 | 5.2E-50 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 54 | 202 | 43.262024 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 127 | 143 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 238 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41340.1 | ubiquitin conjugating enzyme 4. Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. | 0 |
| RefSeq | XP_026657937.2 | ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Phoenix dactylifera] | 0 |
| P16577 | Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8J0T6 | ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103700845 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology