Basic Information
Locus ID:
gene-LOC103700215
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
5-kinase 6
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 14165611 | 14170151 | + | gene-LOC103700215 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 70,621.12 Da | 34.79 | 56.29 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17302 | PIPKc_AtPIP5K_like | 416 | 631 | 2.29608E-150 | - |
| Pfam | PF02493 | MORN repeat | 207 | 228 | 1.9E-4 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 161 | 182 | 2.6E-6 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 184 | 206 | 5.9E-7 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 69 | 91 | 1.2E-7 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 92 | 113 | 9.5E-7 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 115 | 133 | 2.3E-4 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 138 | 159 | 1.9E-5 | IPR003409 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 504 | 628 | 1.1E-49 | IPR002498 |
| SUPERFAMILY | SSF82185 | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 64 | 181 | 1.11E-31 | - |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 412 | 627 | 1.31E-69 | - |
| Gene3D | G3DSA:2.20.110.10 | - | 190 | 249 | 1.2E-9 | - |
| Gene3D | G3DSA:2.20.110.10 | - | 144 | 189 | 7.4E-12 | - |
| Gene3D | G3DSA:2.20.110.10 | - | 99 | 143 | 7.3E-10 | - |
| Gene3D | G3DSA:2.20.110.10 | - | 59 | 98 | 1.1E-7 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 402 | 586 | 8.4E-64 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 587 | 630 | 1.3E-8 | - |
| SMART | SM00330 | PIPK_2 | 443 | 630 | 1.1E-56 | IPR002498 |
| SMART | SM00698 | morn | 159 | 180 | 3.1E-5 | IPR003409 |
| SMART | SM00698 | morn | 205 | 226 | 0.006 | IPR003409 |
| SMART | SM00698 | morn | 136 | 157 | 1.3E-5 | IPR003409 |
| SMART | SM00698 | morn | 90 | 111 | 0.0057 | IPR003409 |
| SMART | SM00698 | morn | 182 | 203 | 1.8E-5 | IPR003409 |
| SMART | SM00698 | morn | 67 | 88 | 6.3E-7 | IPR003409 |
| SMART | SM00698 | morn | 113 | 134 | 0.12 | IPR003409 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 411 | 631 | 42.265049 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 49 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00562 (Inositol phosphate metabolism)
map00562 (Inositol phosphate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04070 (Phosphatidylinositol signaling system)
map04070 (Phosphatidylinositol signaling system)
ko04072 (Phospholipase D signaling pathway)
map04072 (Phospholipase D signaling pathway)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
map04666 (Fc gamma R-mediated phagocytosis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07960.2 | - | 0 |
| RefSeq | XP_038980604.1 | phosphatidylinositol 4-phosphate 5-kinase 6-like [Phoenix dactylifera] | 0 |
| Q9SFB8 | Phosphatidylinositol 4-phosphate 5-kinase 6 OS=Arabidopsis thaliana OX=3702 GN=PIP5K6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9ABL4 | 1-phosphatidylinositol-4-phosphate 5-kinase OS=Phoenix dactylifera OX=42345 GN=LOC103700215 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 2 | COCNU_02G017950, COCNU_02G017960 |
| Arecaceae | Phoenix dactylifera | 7 | gene-LOC103700215, gene-LOC103700566, gene-LOC120110110 ... |