Basic Information
Locus ID:
gene-LOC103699800
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000162F | 460903 | 462491 | + | gene-LOC103699800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 50,567.04 Da | 43.89 | 91.84 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 292 | 359 | 7.0666E-42 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 298 | 343 | 3.8E-11 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 62 | 227 | 1.5E-37 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 292 | 357 | 2.36E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 290 | 361 | 9.6E-18 | IPR036638 |
| SMART | SM00353 | finulus | 300 | 349 | 9.3E-17 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 294 | 343 | 17.447117 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 305 | - | - |
| Coils | Coil | Coil | 333 | 360 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G17880.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. | 0 |
| RefSeq | XP_008780029.4 | transcription factor MYC2-like [Phoenix dactylifera] | 0 |
| A0A060KY90 | Transcription factor MYC1 OS=Solanum lycopersicum OX=4081 GN=MYC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7BKT7 | transcription factor MYC2-like OS=Phoenix dactylifera OX=42345 GN=LOC103699800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology