Basic Information
Locus ID:
gene-LOC103699703
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Thiamine pyrophosphate enzyme, central domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000761F | 116122 | 118180 | - | gene-LOC103699703 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 41,827.64 Da | 38.17 | 76.52 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 186 | 368 | 2.1557E-92 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 62 | 137 | 2.6E-8 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 231 | 356 | 7.1E-16 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 186 | 380 | 1.97E-43 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 66 | 162 | 2.65E-17 | IPR029035 |
| Gene3D | G3DSA:3.40.50.970 | - | 179 | 370 | 7.1E-58 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 61 | 173 | 8.8E-25 | - |
| Coils | Coil | Coil | 329 | 349 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_038976169.1 | pyruvate decarboxylase 3-like [Phoenix dactylifera] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B8ZXY3 | pyruvate decarboxylase OS=Phoenix dactylifera OX=42345 GN=LOC103699703 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology