Basic Information
Locus ID:
gene-LOC103699024
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
DEAD-box ATP-dependent RNA helicase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 12405642 | 12424470 | + | gene-LOC103699024 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 39,890.33 Da | 67.75 | 64.97 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00270 | DEAD/DEAH box helicase | 149 | 200 | 7.5E-9 | IPR011545 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 108 | 186 | 3.22E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 99 | 210 | 1.8E-23 | IPR027417 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 125 | 153 | 10.86482 | IPR014014 |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06480.2 | - | 0 |
| RefSeq | XP_038988531.1 | pre-mRNA-processing ATP-dependent RNA helicase PRP5-like [Phoenix dactylifera] | 0 |
| Q9SQV1 | DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana OX=3702 GN=RH40 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9AP36 | pre-mRNA-processing ATP-dependent RNA helicase PRP5-like OS=Phoenix dactylifera OX=42345 GN=LOC103699024 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology