Basic Information
Locus ID:
gene-LOC103698680
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 2291224 | 2300500 | + | gene-LOC103698680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 96,166.50 Da | 74.94 | 65.81 | -1.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 786 | 826 | 1.77218E-21 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 784 | 831 | 4.1E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 786 | 832 | 1.98E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 766 | 837 | 3.2E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 787 | 826 | 10.748424 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 588 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 239 | - | - |
| Coils | Coil | Coil | 86 | 106 | - | - |
| Coils | Coil | Coil | 486 | 506 | - | - |
| Coils | Coil | Coil | 716 | 736 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_008778944.2 | zinc finger CCCH domain-containing protein 13-like isoform X1 [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B7BJZ6 | zinc finger CCCH domain-containing protein 13-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103698680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology