Basic Information
Locus ID:
gene-LOC103698225
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000390F | 398568 | 402075 | - | gene-LOC103698225 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 26,380.37 Da | 44.92 | 102.91 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 44 | 225 | 1.2E-28 | IPR001245 |
| Pfam | PF14770 | Transmembrane protein 18 | 8 | 54 | 5.8E-7 | IPR026721 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 45 | 227 | 1.48E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 41 | 233 | 3.7E-60 | - |
| SMART | SM00220 | serkin_6 | 3 | 203 | 1.5E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 234 | 25.446159 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 80 | 92 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23140.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 6. Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_038974594.1 | cysteine-rich receptor-like protein kinase 6 isoform X1 [Phoenix dactylifera] | 0 |
| Q9C5S9 | Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8ZT50 | Transmembrane protein 18 OS=Phoenix dactylifera OX=42345 GN=LOC103698225 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103698225 |
| Brassicaceae | Brassica nigra | 1 | BniB02g073180.2N |