Basic Information
Locus ID:
gene-LOC103697716
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000085F | 857470 | 859029 | - | gene-LOC103697716 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 39,552.14 Da | 66.97 | 85.65 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 163 | 206 | 1.69935E-19 | - |
| Pfam | PF13639 | Ring finger domain | 163 | 206 | 1.9E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 143 | 212 | 7.3E-23 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 133 | 211 | 4.5E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 164 | 205 | 9.9E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 164 | 206 | 12.459772 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 375 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72310.1 | RING/U-box superfamily protein. Encodes a putative RING-H2 zinc finger protein ATL3 (ATL3). | 0 |
| RefSeq | XP_008777854.3 | RING-H2 finger protein ATL3-like [Phoenix dactylifera] | 0 |
| Q9XF63 | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7BIP9 | RING-H2 finger protein ATL3-like OS=Phoenix dactylifera OX=42345 GN=LOC103697716 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology