Basic Information
Locus ID:
gene-LOC103697692
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000194F | 289872 | 291961 | - | gene-LOC103697692 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 51,307.22 Da | 48.70 | 90.33 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 40 | 377 | 4.9E-57 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 278 | 348 | 1.83E-14 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 38 | 386 | 8.08E-52 | IPR017853 |
| Gene3D | G3DSA:3.10.50.10 | - | 277 | 348 | 5.8E-83 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 55 | 377 | 5.8E-83 | - |
| SMART | SM00636 | 2g34 | 37 | 377 | 1.8E-59 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 37 | 394 | 53.099632 | IPR001223 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 422 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_038973181.1 | class V chitinase-like [Phoenix dactylifera] | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8ZG98 | class V chitinase-like OS=Phoenix dactylifera OX=42345 GN=LOC103697692 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology