Basic Information
Locus ID:
gene-LOC103697653
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000077F | 489572 | 496444 | - | gene-LOC103697653 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 88,549.48 Da | 55.47 | 57.42 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 356 | 384 | 6.0E-10 | IPR001876 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 390 | 417 | 5.8E-6 | IPR001876 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 349 | 385 | 5.65E-7 | IPR036443 |
| Gene3D | G3DSA:4.10.1060.10 | - | 348 | 386 | 6.4E-16 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 387 | 418 | 3.9E-9 | - |
| SMART | SM00547 | zf_4 | 358 | 382 | 2.8E-6 | IPR001876 |
| SMART | SM00547 | zf_4 | 391 | 415 | 5.5E-6 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 356 | 385 | 10.10503 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 389 | 418 | 9.585588 | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 393 | 412 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 360 | 379 | - | IPR001876 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 639 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 624 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 583 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 342 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 609 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 699 | 714 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 495 | 525 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55040.1 | zinc finger (Ran-binding) family protein. | 0 |
| RefSeq | XP_008777783.2 | uncharacterized protein LOC103697653 [Phoenix dactylifera] | 0 |
| Q8S9K3 | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B7BIP3 | uncharacterized protein LOC103697653 OS=Phoenix dactylifera OX=42345 GN=LOC103697653 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology