Basic Information
Locus ID:
gene-LOC103697580
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold002130F | 11041 | 14458 | - | gene-LOC103697580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 29,643.48 Da | 34.15 | 64.25 | -0.91 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 222 | 274 | 6.8E-13 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 181 | - | - |
| Coils | Coil | Coil | 237 | 275 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_038979092.1 | protein WVD2-like 4 [Phoenix dactylifera] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B9A0C1 | protein WVD2-like 4 OS=Phoenix dactylifera OX=42345 GN=LOC103697580 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology