Basic Information
Locus ID:
gene-LOC103697438
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Ribosomal protein S10p/S20e
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000483F | 204903 | 213056 | - | gene-LOC103697438 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.82 | 14,111.44 Da | 43.44 | 98.20 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00338 | Ribosomal protein S10p/S20e | 30 | 124 | 7.4E-27 | IPR027486 |
| SUPERFAMILY | SSF54999 | Ribosomal protein S10 | 28 | 125 | 5.49E-30 | IPR036838 |
| Gene3D | G3DSA:3.30.70.600 | Ribosomal protein S10 domain | 15 | 127 | 2.3E-47 | IPR036838 |
| SMART | SM01403 | Ribosomal_S10_2 | 30 | 124 | 1.2E-37 | IPR027486 |
| TIGRFAM | TIGR01046 | uS10_euk_arch: ribosomal protein uS10 | 27 | 125 | 1.4E-39 | IPR005729 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 85 | 99 | 3.3E-12 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 63 | 78 | 3.3E-12 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 28 | 41 | 3.3E-12 | IPR001848 |
| Hamap | MF_00508 | 30S ribosomal protein S10 [rpsJ]. | 26 | 125 | 17.974131 | IPR001848 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G45030.1 | Ribosomal protein S10p/S20e family protein. | 0 |
| RefSeq | XP_038974998.1 | 40S ribosomal protein S20-2-like [Phoenix dactylifera] | 0 |
| P49200 | Small ribosomal subunit protein uS10z/uS10x OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B8ZLA6 | 40S ribosomal protein S20-2-like OS=Phoenix dactylifera OX=42345 GN=LOC103697438 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology