Basic Information
Locus ID:
gene-LOC103696753
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 972001 | 977491 | - | gene-LOC103696753 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 22,700.98 Da | 43.96 | 77.61 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 138 | 200 | 2.95384E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 136 | 199 | 1.0E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 62 | 123 | 1.3E-15 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 52 | 200 | 1.82E-43 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 48 | 154 | 6.6E-31 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 155 | 208 | 1.8E-14 | - |
| SMART | SM00054 | efh_1 | 98 | 126 | 0.024 | IPR002048 |
| SMART | SM00054 | efh_1 | 138 | 166 | 2.9E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 62 | 90 | 6.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 174 | 202 | 1.6E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 58 | 93 | 14.401823 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 170 | 205 | 13.034948 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 134 | 169 | 15.629221 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 94 | 129 | 10.775421 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 147 | 159 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 183 | 195 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 107 | 119 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 71 | 83 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03000.1 | EF hand calcium-binding protein family. Calmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent manner | 0 |
| RefSeq | XP_008776688.1 | probable calcium-binding protein CML18 [Phoenix dactylifera] | 0 |
| Q9M8U1 | Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7BH41 | probable calcium-binding protein CML18 OS=Phoenix dactylifera OX=42345 GN=LOC103696753 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology