Basic Information
Locus ID:
gene-LOC103696442
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 29384904 | 29429979 | - | gene-LOC103696442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 134,028.88 Da | 45.60 | 78.03 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02659 | peptidase_C19C | 194 | 522 | 1.43307E-168 | - |
| CDD | cd00121 | MATH | 53 | 176 | 5.24673E-39 | IPR002083 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 621 | 885 | 3.0E-71 | IPR024729 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 196 | 517 | 9.4E-46 | IPR001394 |
| Pfam | PF00917 | MATH domain | 58 | 178 | 4.8E-19 | IPR002083 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 895 | 1123 | 1.0E-53 | IPR029346 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 49 | 183 | 1.13E-40 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 191 | 547 | 2.55E-96 | IPR038765 |
| Gene3D | G3DSA:3.10.20.90 | - | 681 | 798 | 6.4E-45 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 799 | 908 | 1.1E-22 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 193 | 521 | 9.3E-89 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 50 | 192 | 2.2E-51 | IPR008974 |
| SMART | SM00061 | math_3 | 53 | 157 | 5.6E-21 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 51 | 176 | 39.133385 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 196 | 520 | 39.774246 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 197 | 212 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 436 | 453 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
| Coils | Coil | Coil | 536 | 556 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.2 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_038987968.1 | ubiquitin carboxyl-terminal hydrolase 12-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B9AVW9 | ubiquitinyl hydrolase 1 OS=Phoenix dactylifera OX=42345 GN=LOC103696442 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology