Basic Information
Locus ID:
gene-LOC103696071
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 17087252 | 17095331 | + | gene-LOC103696071 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 92,655.39 Da | 48.14 | 74.56 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 515 | 742 | 2.4E-74 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 330 | 474 | 6.0E-52 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 172 | 230 | 1.8E-16 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 327 | 745 | 1.1E-195 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 533 | 707 | 1.1E-195 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 387 | 421 | 9.076014 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 170 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_008775808.2 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Phoenix dactylifera] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7BFU1 | ribonuclease P OS=Phoenix dactylifera OX=42345 GN=LOC103696071 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology