Basic Information
Locus ID:
gene-LOC103696000
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 6719955 | 6721261 | + | gene-LOC103696000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 32,811.97 Da | 80.72 | 79.87 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 111 | 154 | 3.4256E-21 | - |
| Pfam | PF13639 | Ring finger domain | 111 | 154 | 7.1E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 107 | 160 | 1.44E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 73 | 160 | 3.1E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 112 | 153 | 9.7E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 112 | 154 | 12.84335 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 309 | - | - |
| Coils | Coil | Coil | 307 | 309 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16720.1 | TOXICOS EN LEVADURA 2. RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. | 0 |
| RefSeq | XP_008775696.1 | RING-H2 finger protein ATL64-like [Phoenix dactylifera] | 0 |
| Q8L9T5 | RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7BFN5 | RING-type E3 ubiquitin transferase OS=Phoenix dactylifera OX=42345 GN=LOC103696000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology