Basic Information
Locus ID:
gene-LOC103695985
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Raffinose synthase or seed imbibition protein Sip1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000143F | 1192366 | 1198802 | - | gene-LOC103695985 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 83,443.61 Da | 32.42 | 82.85 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 7 | 741 | 0.0 | IPR008811 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 200 | 530 | 3.57E-60 | IPR017853 |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 200 | 518 | 5.7E-15 | IPR013785 |
| ProSiteProfiles | PS50042 | cAMP/cGMP binding motif profile. | 624 | 702 | 8.003 | IPR000595 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55740.1 | seed imbibition 1. | 0 |
| RefSeq | XP_008775672.2 | probable galactinol--sucrose galactosyltransferase 1 [Phoenix dactylifera] | 0 |
| Q84VX0 | Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7BFM8 | galactinol--sucrose galactosyltransferase OS=Phoenix dactylifera OX=42345 GN=LOC103695985 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology