Basic Information
Locus ID:
gene-LOC103695777
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 3661706 | 3664171 | - | gene-LOC103695777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 65,236.10 Da | 31.08 | 90.12 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 406 | 588 | 2.30836E-85 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 47 | 208 | 4.52897E-91 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 451 | 576 | 4.6E-15 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 44 | 212 | 1.3E-35 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 241 | 352 | 3.7E-21 | IPR012000 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 406 | 600 | 8.94E-42 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 236 | 383 | 1.44E-32 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 44 | 220 | 1.18E-44 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 41 | 217 | 5.9E-61 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 400 | 587 | 7.6E-56 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 231 | 393 | 3.4E-42 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 40 | 600 | 1.1E-211 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_008775408.1 | pyruvate decarboxylase 1 [Phoenix dactylifera] | 0 |
| A2XFI3 | Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7BFB0 | pyruvate decarboxylase OS=Phoenix dactylifera OX=42345 GN=LOC103695777 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology