Basic Information
Locus ID:
gene-LOC103695776
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 3667330 | 3669898 | - | gene-LOC103695776 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 65,155.74 Da | 31.99 | 87.11 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 407 | 589 | 2.02674E-88 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 48 | 209 | 5.80654E-94 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 453 | 577 | 7.7E-15 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 45 | 213 | 3.4E-36 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 243 | 362 | 3.0E-21 | IPR012000 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 407 | 601 | 3.57E-40 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 237 | 384 | 2.03E-33 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 45 | 221 | 2.82E-45 | IPR029061 |
| Gene3D | G3DSA:3.40.50.1220 | - | 232 | 394 | 1.3E-41 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 401 | 591 | 5.3E-55 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 42 | 217 | 2.1E-62 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 40 | 601 | 1.8E-214 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_008775407.2 | pyruvate decarboxylase 2-like [Phoenix dactylifera] | 0 |
| A2XFI3 | Pyruvate decarboxylase 2 OS=Oryza sativa subsp. indica OX=39946 GN=PDC2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7BF95 | pyruvate decarboxylase OS=Phoenix dactylifera OX=42345 GN=LOC103695776 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology