Basic Information
Locus ID:
gene-LOC103695721
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
RhoGAP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 13761865 | 13794253 | + | gene-LOC103695721 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 125,855.21 Da | 56.94 | 69.08 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00159 | RhoGAP | 215 | 352 | 1.35352E-28 | - |
| CDD | cd00821 | PH | 54 | 153 | 2.59721E-11 | - |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 654 | 740 | 3.8E-19 | IPR025757 |
| Pfam | PF00169 | PH domain | 54 | 157 | 3.6E-13 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 215 | 358 | 3.7E-28 | IPR000198 |
| SUPERFAMILY | SSF50729 | PH domain-like | 36 | 158 | 1.78E-17 | - |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 215 | 408 | 6.47E-31 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 39 | 159 | 3.9E-17 | IPR011993 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 183 | 407 | 1.9E-38 | IPR008936 |
| SMART | SM00233 | PH_update | 52 | 160 | 2.0E-15 | IPR001849 |
| SMART | SM00324 | RhoGAP_3 | 212 | 402 | 5.8E-25 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 51 | 158 | 15.5942 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 206 | 405 | 29.113743 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 947 | 972 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 493 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1036 | 1107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 852 | 935 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 803 | 1107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 988 | 1026 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1124 | 1147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 803 | 843 | - | - |
| Coils | Coil | Coil | 643 | 684 | - | - |
| Coils | Coil | Coil | 1105 | 1132 | - | - |
| Coils | Coil | Coil | 716 | 736 | - | - |
| Coils | Coil | Coil | 242 | 262 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.4 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_008775337.2 | rho GTPase-activating protein 7-like isoform X1 [Phoenix dactylifera] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7BF55 | rho GTPase-activating protein 7-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103695721 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology