HalophFGD

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Basic Information
Locus ID: gene-LOC103695459
Species & Taxonomic ID: Phoenix dactylifera & 42345
Genome Assembly: GCF_009389715.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
scaffold000146F 790491 792737 + gene-LOC103695459
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.76 51,513.85 Da 35.40 85.52 -0.04
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 361 406 2.8E-12 IPR005174
SUPERFAMILY SSF81383 F-box domain 86 156 6.7E-5 IPR036047
Gene3D G3DSA:1.20.1280.50 - 86 128 1.5E-5 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G68960.1 Protein of unknown function (DUF295). 0
RefSeq XP_008775020.3 F-box protein At2g26160-like [Phoenix dactylifera] 0
TrEMBL A0A8B7BDX2 F-box protein At2g26160-like OS=Phoenix dactylifera OX=42345 GN=LOC103695459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Arecaceae Cocos nucifera 1 COCNU_04G008290
Arecaceae Phoenix dactylifera 1 gene-LOC103695459
Poaceae Echinochloa crus-galli 34 AH02.3272, AH02.3273, AH02.3796, AH03.2533, AH04.980 ...
AH06.1103, AH08.1984, AH08.2092, BH02.3824, BH03.2682, BH03.455, BH03.477, BH05.1833, BH07.3642, BH07.3835, BH07.4132, BH07.4134, BH08.2195, BH08.2196, CH01.1323, CH01.5436, CH02.205, CH03.1050, CH03.2886, CH03.2888, CH03.532, CH03.534, CH03.541, CH03.558, CH07.3713, CH07.3895, CH07.3899, CH08.2390, CH09.2859
Poaceae Eleusine coracana subsp. coracana 19 gene-QOZ80_2AG0151040, gene-QOZ80_2BG0206460 ...
gene-QOZ80_3AG0235060, gene-QOZ80_3AG0238380, gene-QOZ80_3BG0283200, gene-QOZ80_3BG0293070, gene-QOZ80_6AG0535010, gene-QOZ80_6AG0538280, gene-QOZ80_6AG0541120, gene-QOZ80_6AG0541140, gene-QOZ80_6BG0488220, gene-QOZ80_7AG0557770, gene-QOZ80_7AG0557840, gene-QOZ80_7BG0588790, gene-QOZ80_7BG0588920, gene-QOZ80_7BG0611400, gene-QOZ80_8AG0633080, gene-QOZ80_8AG0633960, gene-QOZ80_9AG0671190
Poaceae Hordeum vulgare 13 HORVU.MOREX.r3.1HG0038220.1.CDS1 ...
HORVU.MOREX.r3.1HG0038230.1.CDS1, HORVU.MOREX.r3.1HG0038240.1.CDS1, HORVU.MOREX.r3.2HG0190170.1.CDS1, HORVU.MOREX.r3.2HG0200120.1, HORVU.MOREX.r3.2HG0215340.1.CDS1, HORVU.MOREX.r3.2HG0215350.1.CDS1, HORVU.MOREX.r3.3HG0307220.1.CDS1, HORVU.MOREX.r3.4HG0340640.1, HORVU.MOREX.r3.5HG0479420.1, HORVU.MOREX.r3.6HG0571620.1.CDS1, HORVU.MOREX.r3.6HG0622050.1.CDS1, HORVU.MOREX.r3.7HG0675810.1.CDS1
Poaceae Lolium multiflorum 20 gene-QYE76_005851, gene-QYE76_025186, gene-QYE76_025196 ...
gene-QYE76_029654, gene-QYE76_029655, gene-QYE76_033620, gene-QYE76_055947, gene-QYE76_059645, gene-QYE76_059647, gene-QYE76_059648, gene-QYE76_059649, gene-QYE76_062013, gene-QYE76_062016, gene-QYE76_063071, gene-QYE76_063072, gene-QYE76_063280, gene-QYE76_063284, gene-QYE76_069369, gene-QYE76_069386, gene-QYE76_071691
Poaceae Oryza coarctata 16 Oco01G011790, Oco01G029600, Oco02G030780, Oco05G000740 ...
Oco06G000730, Oco07G003830, Oco07G009010, Oco08G008950, Oco13G002480, Oco13G002800, Oco13G012080, Oco14G002700, Oco14G012340, Oco22G005220, Oco22G008260, Oco24G003730
Poaceae Oryza sativa 11 LOC_Os01g27680.1, LOC_Os01g71250.1, LOC_Os03g02210.1 ...
LOC_Os04g40920.1, LOC_Os07g08040.1, LOC_Os07g40160.1, LOC_Os08g18890.1, LOC_Os08g25670.1, LOC_Os08g27540.3, LOC_Os11g12470.1, LOC_Os11g34790.1
Poaceae Paspalum vaginatum 8 gene-BS78_01G141900, gene-BS78_02G051000 ...
gene-BS78_02G236200, gene-BS78_02G333600, gene-BS78_03G328000, gene-BS78_03G349100, gene-BS78_07G184300, gene-BS78_07G184400
Poaceae Puccinellia tenuiflora 21 Pt_Chr0101983, Pt_Chr0104565, Pt_Chr0104566, Pt_Chr0106320 ...
Pt_Chr0201650, Pt_Chr0301837, Pt_Chr0306674, Pt_Chr0306676, Pt_Chr0306677, Pt_Chr0306888, Pt_Chr0306933, Pt_Chr0306951, Pt_Chr0306952, Pt_Chr0504597, Pt_Chr0505724, Pt_Chr0600763, Pt_Chr0702256, Pt_Chr0702259, Pt_Chr0704137, Pt_Chr0704138, Pt_Chr0705331
Poaceae Sporobolus alterniflorus 9 Chr01G038310, Chr02G002910, Chr05G031540, Chr06G013940 ...
Chr07G024310, Chr12G001140, Chr12G001200, Chr16G003480, Chr16G016080
Poaceae Thinopyrum elongatum 19 Tel1E01G276000, Tel2E01G711100, Tel2E01G752800 ...
Tel2E01G807700, Tel2E01G825600, Tel2E01G864900, Tel3E01G307800, Tel3E01G646700, Tel3E01G647400, Tel4E01G064100, Tel4E01G110600, Tel4E01G225600, Tel4E01G578100, Tel5E01G397800, Tel5E01G886300, Tel6E01G264600, Tel6E01G614800, Tel7E01G144900, Tel7E01G235800
Poaceae Triticum dicoccoides 28 gene_TRIDC2AG080290, gene_TRIDC2BG072850 ...
gene_TRIDC2BG088440, gene_TRIDC2BG088460, gene_TRIDC3AG039280, gene_TRIDC3BG042570, gene_TRIDC3BG043390, gene_TRIDC4AG053870, gene_TRIDC4AG053890, gene_TRIDC4AG070340, gene_TRIDC4BG004950, gene_TRIDC5AG036450, gene_TRIDC5AG074050, gene_TRIDC5BG076390, gene_TRIDC6AG017290, gene_TRIDC6AG040710, gene_TRIDC6AG051960, gene_TRIDC6BG022980, gene_TRIDC6BG047710, gene_TRIDC6BG060540, gene_TRIDC7AG013900, gene_TRIDC7AG029410, gene_TRIDC7AG045430, gene_TRIDC7BG002250, gene_TRIDC7BG002260, gene_TRIDC7BG002300, gene_TRIDC7BG002310, gene_TRIDC7BG002320
Poaceae Triticum aestivum 65 TraesCS1A02G146500.1.cds1, TraesCS1B02G165000.1.cds1 ...
TraesCS1B02G175300.1, TraesCS1D02G142800.1, TraesCS2A02G417400.1, TraesCS2A02G479200.1, TraesCS2A02G554800.1.cds1, TraesCS2B02G503800.1, TraesCS2B02G515100.1, TraesCS2B02G614700.1.cds1, TraesCS2D02G414700.1, TraesCS2D02G487800.1, TraesCS2D02G510900.1, TraesCS2D02G584200.1.cds1, TraesCS3A02G137200.1, TraesCS3A02G263200.1, TraesCS3B02G077700.1.cds1, TraesCS3B02G206000.1, TraesCS3B02G284500.1, TraesCS3B02G289000.1, TraesCS3B02G441500.1, TraesCS3D02G104700.1.cds1, TraesCS3D02G138000.1, TraesCS3D02G182000.1, TraesCS3D02G402100.1, TraesCS4A02G281100.1.cds1, TraesCS4A02G481500.1, TraesCS4B02G029800.1, TraesCS4D02G027300.1, TraesCS5A02G229100.1, TraesCS5A02G520800.1.cds1, TraesCS5B02G204200.1, TraesCS5B02G563200.1.cds1, TraesCS5D02G212100.1, TraesCS5D02G212400.1, TraesCS5D02G238600.1, TraesCS5D02G255300.1, TraesCS6A02G127600.1.cds1, TraesCS6A02G128000.1.cds1, TraesCS6A02G324300.1.cds1, TraesCS6A02G344600.1, TraesCS6A02G344900.1, TraesCS6B02G155900.1, TraesCS6B02G156600.1.cds1, TraesCS6B02G156700.1.cds1, TraesCS6B02G159500.1, TraesCS6B02G292700.1, TraesCS6B02G377300.1, TraesCS6D02G117800.1.cds1, TraesCS6D02G327200.1, TraesCS7A02G014900.1, TraesCS7A02G069200.1, TraesCS7A02G229700.1, TraesCS7B02G015500.1, TraesCS7B02G015600.1, TraesCS7B02G195600.1, TraesCS7B02G257600.1, TraesCS7D02G011900.1.cds1, TraesCS7D02G063700.1, TraesCS7D02G114400.1, TraesCS7D02G114500.1.cds1, TraesCS7D02G114800.1, TraesCS7D02G115000.1.cds1, TraesCS7D02G230300.1.cds1, TraesCS7D02G230400.1
Poaceae Zoysia japonica 1 nbis-gene-30839
Portulacaceae Portulaca oleracea 1 evm.TU.LG25.17
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.