Basic Information
Locus ID:
gene-BS78_K342700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_97 | 239585 | 251560 | - | gene-BS78_K342700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 54,802.96 Da | 39.61 | 94.64 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 192 | 456 | 1.2E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 177 | 475 | 1.35E-70 | IPR011009 |
| Gene3D | G3DSA:1.20.930.20 | - | 1 | 119 | 1.1E-27 | IPR036537 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 153 | 264 | 2.4E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 265 | 465 | 4.7E-50 | - |
| SMART | SM00220 | serkin_6 | 189 | 458 | 2.1E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 189 | 465 | 35.057278 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 305 | 317 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 195 | 217 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23240.2 | - | 0 |
| RefSeq | XP_021317531.1 | cysteine-rich receptor-like protein kinase 15 isoform X2 [Sorghum bicolor] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A1Z5RJZ5 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3005G210200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH04.2576 |
| Poaceae | Oryza coarctata | 1 | Oco21G009560 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_05G254200, gene-BS78_K262300, gene-BS78_K341200 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr16G007570 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G128200 |
| Poaceae | Triticum aestivum | 1 | TraesCS6B02G067800.1 |
| Poaceae | Zea mays | 1 | Zm00001eb115890_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18271 |