Basic Information
Locus ID:
gene-BS78_K341200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_97 | 62851 | 68333 | - | gene-BS78_K341200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 58,687.28 Da | 44.95 | 92.18 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 190 | 495 | 2.7E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 171 | 500 | 1.25E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 152 | 269 | 1.3E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 270 | 504 | 4.0E-46 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 9 | 119 | 1.6E-26 | IPR036537 |
| SMART | SM00220 | serkin_6 | 189 | 497 | 1.7E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 189 | 503 | 34.279911 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 316 | 328 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 195 | 217 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_025826831.1 | cysteine-rich receptor-like protein kinase 10 [Panicum hallii] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2T7CR03 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_8G251100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH04.2576 |
| Poaceae | Oryza coarctata | 1 | Oco21G009560 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_05G254200, gene-BS78_K262300, gene-BS78_K341200 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr16G007570 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G128200 |
| Poaceae | Triticum aestivum | 1 | TraesCS6B02G067800.1 |
| Poaceae | Zea mays | 1 | Zm00001eb115890_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18271 |