Basic Information
Locus ID:
gene-BS78_K330000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_89 | 11019 | 12203 | + | gene-BS78_K330000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.18 | 40,074.35 Da | 52.54 | 90.67 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 10 | 48 | 4.9E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 82 | 9.03E-13 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 141 | 313 | 1.92E-10 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 48 | 3.3E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 81 | 343 | 3.9E-13 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 8 | 61 | 9.497469 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G28410.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_039818605.1 | MEIOTIC F-BOX protein MOF-like [Panicum virgatum] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T0PZM3 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG196406 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology