Basic Information
Locus ID:
gene-BS78_K325600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_860 | 77262 | 77792 | - | gene-BS78_K325600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 15,363.52 Da | 44.26 | 71.82 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 27 | 126 | 3.61872E-37 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 38 | 120 | 3.8E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 126 | 6.2E-34 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 24 | 129 | 9.3E-34 | IPR008972 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 18 | 6.0 | - |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 27 | 128 | 35.456993 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60280.1 | uclacyanin 3. Encodes blue copper-binding protein III. | 0 |
| RefSeq | XP_004955548.2 | basic blue protein [Setaria italica] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | K4A0D5 | Phytocyanin domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_2G043500v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology