Basic Information
Locus ID:
gene-BS78_K313000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_80 | 120879 | 125370 | - | gene-BS78_K313000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 35,439.43 Da | 41.23 | 82.25 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 2 | 146 | 1.1E-28 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 169 | 265 | 1.7E-12 | IPR000535 |
| SUPERFAMILY | SSF49354 | PapD-like | 161 | 273 | 1.91E-17 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 151 | 6.09E-36 | IPR011009 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 162 | 304 | 7.5E-20 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 161 | 5.3E-41 | - |
| SMART | SM00220 | serkin_6 | 1 | 154 | 7.0E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 154 | 23.25539 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 168 | 289 | 14.974634 | IPR000535 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1 | 13 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_015615809.1 | putative receptor-like protein kinase At4g00960 isoform X2 [Oryza sativa Japonica Group] | 0 |
| O65472 | Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=CRK12 PE=3 SV=3 | 0 | |
| TrEMBL | Q2R1E4 | Protein kinase domain containing protein, expressed OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g39450 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology