Basic Information
Locus ID:
gene-BS78_K280800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_634 | 86058 | 88994 | - | gene-BS78_K280800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.58 | 49,844.91 Da | 38.99 | 93.76 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 4 | 37 | 4.73362E-7 | - |
| Pfam | PF00069 | Protein kinase domain | 129 | 394 | 8.5E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 113 | 420 | 2.29E-68 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 4 | 41 | 1.44E-5 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 4 | 48 | 4.2E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 207 | 416 | 1.1E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 89 | 206 | 1.6E-23 | - |
| SMART | SM00220 | serkin_6 | 128 | 399 | 2.5E-34 | IPR000719 |
| SMART | SM00179 | egfca_6 | 4 | 46 | 2.7E-5 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 128 | 404 | 35.212753 | IPR000719 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 20 | 31 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 134 | 159 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 251 | 263 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 4 | 29 | - | IPR018097 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 447 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16130.1 | wall associated kinase-like 2. wall-associated kinase like | 0 |
| RefSeq | XP_012702453.2 | wall-associated receptor kinase 2 [Setaria italica] | 0 |
| Q7X8C5 | Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana OX=3702 GN=WAKL2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A059Q251 | Protein kinase domain-containing protein OS=Saccharum hybrid cultivar R570 OX=131158 GN=SHCRBa_201_F17_F_350 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9AG0688840 |
| Poaceae | Paspalum vaginatum | 12 | gene-BS78_05G248600, gene-BS78_05G248800, gene-BS78_K280400 ... |
| Poaceae | Zea mays | 1 | Zm00001eb262530_P001 |