Basic Information
Locus ID:
gene-BS78_K242500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_4758 | 28841 | 30356 | - | gene-BS78_K242500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 15,206.75 Da | 31.70 | 109.10 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 36 | 125 | 3.5E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 30 | 124 | 7.9E-22 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 22 | 130 | 8.6E-26 | - |
| SMART | SM00220 | serkin_6 | 6 | 133 | 0.002 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 133 | 14.958733 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26980.2 | CBL-interacting protein kinase 3. encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. | 0 |
| RefSeq | XP_021308763.1 | CBL-interacting protein kinase 31 [Sorghum bicolor] | 0 |
| Q8LIG4 | CBL-interacting protein kinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811Q819 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS40280 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G138500, gene-BS78_K242500 |