Basic Information
Locus ID:
gene-BS78_K238800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_47 | 391345 | 392195 | + | gene-BS78_K238800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 28,390.28 Da | 47.66 | 77.73 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17123 | RING-like zinc finger | 202 | 232 | 3.1E-7 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 198 | 255 | 5.5E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 197 | 253 | 2.7E-10 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 203 | 250 | 10.940213 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039824240.1 | uncharacterized protein LOC120686137 [Panicum virgatum] | 0 |
| TrEMBL | A0A1E5UIE9 | RING-type domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0026319 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||