HalophFGD

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Basic Information
Locus ID: gene-BS78_K237900
Species & Taxonomic ID: Paspalum vaginatum & 158149
Genome Assembly: GCA_026573395.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
scaffold_47 225491 228037 + gene-BS78_K237900
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.17 56,936.09 Da 48.35 96.74 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 39 82 2.62E-5 IPR036047
SUPERFAMILY SSF52058 L domain-like 182 371 3.4E-9 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 120 385 4.5E-9 IPR032675
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_004979374.1 uncharacterized protein LOC101786285 [Setaria italica] 0
TrEMBL K3ZI31 F-box domain-containing protein OS=Setaria italica OX=4555 GN=101786285 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_22601
Amaranthaceae Suaeda glauca 2 Sgl45688, Sgl50449
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.7AG0013500, CQ.Regalona.r1.7AG0013530
Poaceae Echinochloa crus-galli 65 AH01.38, AH01.4289, AH02.401, AH03.1915, AH04.1452, AH04.55 ...
AH04.56, AH07.3327, AH08.109, AH08.69, AH09.1793, AH09.2012, AH09.2511, AH09.2518, BH01.1066, BH02.2221, BH02.424, BH04.1361, BH04.1476, BH04.63, BH05.14, BH06.103, BH06.2604, BH07.1521, BH07.2954, BH07.3191, BH07.914, BH08.155, BH08.20, BH08.30, BH08.33, BH08.71, BH08.72, BH08.74, BH09.2171, BH09.2736, BH09.2742, BH09.685, CH01.5269, CH01.576, CH02.2379, CH02.467, CH03.2831, CH03.2832, CH04.160, CH04.1679, CH04.1688, CH05.34, CH06.2910, CH07.1327, CH07.2527, CH07.2645, CH07.3529, CH07.667, CH07.668, CH08.119, CH08.165, CH08.176, CH08.195, CH09.2316, CH09.2930, CH09.2933, CH09.2934, CH09.3107, Contig181.114
Poaceae Eleusine coracana subsp. coracana 40 gene-QOZ80_1AG0022220, gene-QOZ80_1AG0022280 ...
gene-QOZ80_1BG0060600, gene-QOZ80_2AG0105700, gene-QOZ80_2AG0145100, gene-QOZ80_2AG0145190, gene-QOZ80_2BG0159110, gene-QOZ80_2BG0197190, gene-QOZ80_2BG0200780, gene-QOZ80_5AG0380260, gene-QOZ80_5AG0403960, gene-QOZ80_5BG0417470, gene-QOZ80_5BG0426040, gene-QOZ80_5BG0427350, gene-QOZ80_5BG0452360, gene-QOZ80_6AG0507530, gene-QOZ80_6AG0540390, gene-QOZ80_6AG0548650, gene-QOZ80_6AG0549180, gene-QOZ80_6BG0458730, gene-QOZ80_6BG0493700, gene-QOZ80_6BG0502300, gene-QOZ80_6BG0502730, gene-QOZ80_7AG0553880, gene-QOZ80_7BG0584870, gene-QOZ80_7BG0584910, gene-QOZ80_8AG0615090, gene-QOZ80_8AG0615160, gene-QOZ80_8AG0615210, gene-QOZ80_8AG0615340, gene-QOZ80_8AG0615360, gene-QOZ80_8AG0615370, gene-QOZ80_8AG0615540, gene-QOZ80_8BG0642300, gene-QOZ80_8BG0642560, gene-QOZ80_8BG0642620, gene-QOZ80_8BG0642850, gene-QOZ80_8BG0643020, gene-QOZ80_8BG0645870, gene-QOZ80_8BG0662250
Poaceae Hordeum vulgare 27 HORVU.MOREX.r3.1HG0062550.1, HORVU.MOREX.r3.1HG0085090.1 ...
HORVU.MOREX.r3.2HG0123760.1.CDS1, HORVU.MOREX.r3.2HG0210090.1, HORVU.MOREX.r3.2HG0210110.1, HORVU.MOREX.r3.3HG0319680.1, HORVU.MOREX.r3.4HG0337270.1, HORVU.MOREX.r3.4HG0412290.1, HORVU.MOREX.r3.5HG0442850.1, HORVU.MOREX.r3.5HG0442960.1, HORVU.MOREX.r3.5HG0462370.1, HORVU.MOREX.r3.5HG0477170.1, HORVU.MOREX.r3.5HG0484800.1, HORVU.MOREX.r3.5HG0491690.1, HORVU.MOREX.r3.5HG0492130.1, HORVU.MOREX.r3.5HG0492430.1, HORVU.MOREX.r3.5HG0493210.1, HORVU.MOREX.r3.5HG0493280.1, HORVU.MOREX.r3.5HG0493290.1, HORVU.MOREX.r3.5HG0493300.1.CDS1, HORVU.MOREX.r3.5HG0493780.1, HORVU.MOREX.r3.5HG0494110.1, HORVU.MOREX.r3.5HG0494340.1, HORVU.MOREX.r3.5HG0494350.1, HORVU.MOREX.r3.5HG0494710.1, HORVU.MOREX.r3.5HG0496700.1, HORVU.MOREX.r3.6HG0546140.1
Poaceae Lolium multiflorum 32 gene-QYE76_001586, gene-QYE76_003671, gene-QYE76_005960 ...
gene-QYE76_005983, gene-QYE76_006176, gene-QYE76_006286, gene-QYE76_006410, gene-QYE76_006441, gene-QYE76_006448, gene-QYE76_006522, gene-QYE76_006541, gene-QYE76_006542, gene-QYE76_006553, gene-QYE76_006575, gene-QYE76_006578, gene-QYE76_006592, gene-QYE76_006604, gene-QYE76_007116, gene-QYE76_015188, gene-QYE76_015190, gene-QYE76_016784, gene-QYE76_024659, gene-QYE76_037183, gene-QYE76_037393, gene-QYE76_039003, gene-QYE76_039005, gene-QYE76_039092, gene-QYE76_039474, gene-QYE76_047572, gene-QYE76_050868, gene-QYE76_055513, gene-QYE76_062155
Poaceae Oryza coarctata 29 Oco02G022210, Oco03G000340, Oco04G000340, Oco04G021260 ...
Oco06G012350, Oco07G009060, Oco07G016510, Oco08G009050, Oco08G015950, Oco08G015960, Oco09G015050, Oco09G017490, Oco09G017960, Oco10G017340, Oco14G012070, Oco17G008530, Oco17G008540, Oco17G008670, Oco17G008700, Oco17G009090, Oco18G008770, Oco18G008790, Oco18G008940, Oco21G006460, Oco21G006510, Oco21G006570, Oco22G007590, Oco22G007650, Oco22G007710
Poaceae Oryza sativa 38 LOC_Os01g40180.1, LOC_Os01g56730.1, LOC_Os02g01530.1 ...
LOC_Os02g01550.1, LOC_Os03g10540.1, LOC_Os03g11790.1, LOC_Os03g11874.1, LOC_Os03g42730.1, LOC_Os04g40330.1, LOC_Os04g40370.1, LOC_Os04g53510.1, LOC_Os04g53520.1, LOC_Os05g45520.1, LOC_Os05g45570.1, LOC_Os05g45870.1, LOC_Os05g45875.1, LOC_Os05g46090.1, LOC_Os05g49680.1, LOC_Os05g49980.1, LOC_Os06g04690.1, LOC_Os06g04710.1, LOC_Os06g04980.1, LOC_Os08g43840.1, LOC_Os09g15590.1, LOC_Os09g32410.1, LOC_Os09g32580.1, LOC_Os09g32600.1, LOC_Os09g32610.1, LOC_Os09g32660.1, LOC_Os09g32860.1, LOC_Os09g32870.1, LOC_Os09g32910.1, LOC_Os09g33620.1, LOC_Os10g38890.1, LOC_Os11g32360.1, LOC_Os11g32410.1, LOC_Os11g32810.1, LOC_Os11g32940.1
Poaceae Paspalum vaginatum 34 gene-BS78_02G032100, gene-BS78_02G145400, gene-BS78_K112200 ...
gene-BS78_02G169400, gene-BS78_02G171400, gene-BS78_02G177500, gene-BS78_02G217600, gene-BS78_03G336200, gene-BS78_04G261500, gene-BS78_06G254700, gene-BS78_06G259600, gene-BS78_06G261000, gene-BS78_06G261400, gene-BS78_06G261500, gene-BS78_06G261600, gene-BS78_07G010700, gene-BS78_07G016600, gene-BS78_07G016900, gene-BS78_07G018100, gene-BS78_07G018300, gene-BS78_07G018500, gene-BS78_07G018600, gene-BS78_09G201200, gene-BS78_09G201300, gene-BS78_09G239200, gene-BS78_09G258700, gene-BS78_09G258800, gene-BS78_10G011800, gene-BS78_10G013200, gene-BS78_10G050000, gene-BS78_10G069700, gene-BS78_10G252600, gene-BS78_K237800, gene-BS78_K237900
Poaceae Puccinellia tenuiflora 39 Pt_Chr0103602, Pt_Chr0105780, Pt_Chr0105781, Pt_Chr0200146 ...
Pt_Chr0200998, Pt_Chr0205033, Pt_Chr0300118, Pt_Chr0303132, Pt_Chr0303183, Pt_Chr0305132, Pt_Chr0305151, Pt_Chr0501152, Pt_Chr0503623, Pt_Chr0604550, Pt_Chr0700041, Pt_Chr0700928, Pt_Chr0700929, Pt_Chr0701013, Pt_Chr0701363, Pt_Chr0701367, Pt_Chr0701368, Pt_Chr0701400, Pt_Chr0701407, Pt_Chr0701408, Pt_Chr0701425, Pt_Chr0701429, Pt_Chr0701438, Pt_Chr0701442, Pt_Chr0701478, Pt_Chr0701486, Pt_Chr0701489, Pt_Chr0701528, Pt_Chr0701632, Pt_Chr0701712, Pt_Chr0701727, Pt_Chr0701758, Pt_Chr0702731, Pt_Chr0705350, Pt_Chr0705360
Poaceae Sporobolus alterniflorus 14 Chr02G005670, Chr05G027700, Chr06G003150, Chr07G010790 ...
Chr0G006460, Chr12G018720, Chr14G000560, Chr15G004560, Chr16G006340, Chr16G018370, Chr17G005730, Chr17G007820, Chr17G017550, Chr19G003990
Poaceae Thinopyrum elongatum 44 Tel1E01G109600, Tel1E01G109900, Tel1E01G110200 ...
Tel1E01G618800, Tel1E01G619200, Tel1E01G619500, Tel1E01G623500, Tel1E01G623600, Tel1E01G624000, Tel2E01G271500, Tel2E01G312600, Tel2E01G956100, Tel2E01G992100, Tel3E01G201400, Tel3E01G497800, Tel3E01G498100, Tel3E01G582200, Tel3E01G771100, Tel3E01G847500, Tel4E01G566600, Tel5E01G170400, Tel5E01G417400, Tel5E01G434700, Tel5E01G435000, Tel5E01G435100, Tel5E01G437900, Tel5E01G441000, Tel5E01G441500, Tel5E01G441900, Tel5E01G442000, Tel5E01G447800, Tel5E01G447900, Tel5E01G448000, Tel5E01G448100, Tel5E01G448400, Tel5E01G451600, Tel5E01G456400, Tel5E01G460300, Tel5E01G460600, Tel5E01G464800, Tel5E01G488300, Tel6E01G119400, Tel6E01G122800, Tel6E01G123400
Poaceae Triticum dicoccoides 38 gene_TRIDC1AG006870, gene_TRIDC1AG055890 ...
gene_TRIDC1AG056130, gene_TRIDC1BG008750, gene_TRIDC2BG019450, gene_TRIDC3AG014620, gene_TRIDC3AG052590, gene_TRIDC3BG019240, gene_TRIDC3BG058990, gene_TRIDC4BG052300, gene_TRIDC5AG013130, gene_TRIDC5AG041130, gene_TRIDC5AG041450, gene_TRIDC5AG042250, gene_TRIDC5AG042290, gene_TRIDC5AG042920, gene_TRIDC5AG042930, gene_TRIDC5AG043090, gene_TRIDC5AG043930, gene_TRIDC5AG044870, gene_TRIDC5AG073290, gene_TRIDC5AG073320, gene_TRIDC5BG007030, gene_TRIDC5BG041570, gene_TRIDC5BG043210, gene_TRIDC5BG044810, gene_TRIDC5BG044840, gene_TRIDC5BG045280, gene_TRIDC5BG045310, gene_TRIDC5BG045460, gene_TRIDC5BG046110, gene_TRIDC5BG046780, gene_TRIDC5BG046990, gene_TRIDC5BG047130, gene_TRIDC5BG047890, gene_TRIDC5BG049200, gene_TRIDC6AG005780, gene_TRIDC6BG008220
Poaceae Triticum aestivum 137 TraesCS1A02G051000.1, TraesCS1A02G114300.1 ...
TraesCS1A02G246100.1, TraesCS1A02G379500.1, TraesCS1A02G382000.1, TraesCS1B02G067400.1, TraesCS1B02G067700.1, TraesCS1B02G067800.1, TraesCS1B02G184400.1, TraesCS1B02G356000.1, TraesCS1B02G401200.1, TraesCS1B02G406900.1, TraesCS1D02G053100.1, TraesCS1D02G172900.1, TraesCS1D02G345000.1, TraesCS1D02G386600.1, TraesCS1D02G386700.2, TraesCS1D02G389700.1, TraesCS2A02G487600.1, TraesCS2A02G554600.1, TraesCS2B02G153700.1, TraesCS2B02G439600.1, TraesCS2B02G514900.1, TraesCS2B02G570700.1, TraesCS2B02G589300.1, TraesCS2B02G589400.1, TraesCS2D02G559800.1, TraesCS2D02G592200.1, TraesCS2D02G592300.1, TraesCS3A02G117900.1, TraesCS3A02G296800.1, TraesCS3A02G364700.1, TraesCS3A02G364900.1, TraesCS3B02G137200.3, TraesCS3B02G396800.1, TraesCS3B02G524200.1, TraesCS3D02G119700.1, TraesCS3D02G305900.1, TraesCS3D02G358100.2, TraesCS3D02G474400.1, TraesCS4B02G060700.1, TraesCS4B02G306800.1, TraesCS4B02G345300.1, TraesCS4D02G304800.1, TraesCS4D02G340300.1, TraesCS5A02G085700.1, TraesCS5A02G260800.1, TraesCS5A02G264100.2, TraesCS5A02G266300.1, TraesCS5A02G271900.1, TraesCS5A02G272000.1, TraesCS5A02G272100.1, TraesCS5A02G274900.1, TraesCS5A02G275200.1, TraesCS5A02G275400.1, TraesCS5A02G275500.1, TraesCS5A02G276900.1, TraesCS5A02G277000.1, TraesCS5A02G281000.1, TraesCS5A02G281300.1, TraesCS5A02G281400.1, TraesCS5A02G281500.1, TraesCS5A02G286300.2, TraesCS5A02G286400.1, TraesCS5A02G293200.1, TraesCS5A02G299900.1, TraesCS5A02G303600.1, TraesCS5A02G303700.1, TraesCS5A02G514200.1, TraesCS5A02G514300.1, TraesCS5B02G042500.1, TraesCS5B02G259200.1, TraesCS5B02G260500.1, TraesCS5B02G263500.1, TraesCS5B02G263900.1, TraesCS5B02G272200.1, TraesCS5B02G272400.1, TraesCS5B02G272500.1, TraesCS5B02G274100.2, TraesCS5B02G274700.1, TraesCS5B02G275000.1, TraesCS5B02G276700.1, TraesCS5B02G276800.1, TraesCS5B02G280300.1, TraesCS5B02G280400.1, TraesCS5B02G280500.2, TraesCS5B02G280600.1, TraesCS5B02G285600.1, TraesCS5B02G285700.1, TraesCS5B02G286800.1, TraesCS5B02G287000.1, TraesCS5B02G287800.1, TraesCS5B02G291300.1, TraesCS5B02G292300.1, TraesCS5B02G304000.2, TraesCS5D02G048200.1, TraesCS5D02G268300.1, TraesCS5D02G269700.1, TraesCS5D02G271700.1, TraesCS5D02G272200.1, TraesCS5D02G279500.2, TraesCS5D02G279600.1, TraesCS5D02G279700.1.cds1, TraesCS5D02G279800.1, TraesCS5D02G280200.1, TraesCS5D02G280300.1, TraesCS5D02G282800.1, TraesCS5D02G282900.1, TraesCS5D02G284300.1, TraesCS5D02G284400.1, TraesCS5D02G287400.1, TraesCS5D02G287500.1, TraesCS5D02G287900.1, TraesCS5D02G288200.1, TraesCS5D02G288300.1, TraesCS5D02G288400.1, TraesCS5D02G288500.1, TraesCS5D02G288600.1, TraesCS5D02G293900.1, TraesCS5D02G294000.1, TraesCS5D02G295200.1, TraesCS5D02G295400.1, TraesCS5D02G298100.1, TraesCS5D02G300400.1, TraesCS5D02G310300.1, TraesCS6A02G046000.1, TraesCS6A02G046200.1, TraesCS6A02G048500.1, TraesCS6B02G062100.1, TraesCS6B02G062200.2, TraesCS6B02G065100.1, TraesCS6D02G053200.1, TraesCS6D02G053300.1, TraesCS7B02G082200.1, TraesCS7D02G266900.1, TraesCSU02G107500.1, TraesCSU02G236400.1.cds1
Poaceae Zea mays 3 Zm00001eb143720_P003, Zm00001eb143790_P005 ...
Zm00001eb276920_P001
Poaceae Zoysia japonica 5 nbis-gene-45661, nbis-gene-51908, nbis-gene-52926 ...
nbis-gene-58533, nbis-gene-59015
Poaceae Zoysia macrostachya 3 Zma_g17528, Zma_g17529, Zma_g18906
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