Basic Information
Locus ID:
gene-BS78_K230800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_4520 | 31 | 2714 | - | gene-BS78_K230800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.96 | 41,124.86 Da | 52.08 | 86.39 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 84 | 359 | 5.82659E-161 | - |
| Pfam | PF00069 | Protein kinase domain | 97 | 336 | 2.2E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 84 | 350 | 3.2E-60 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 84 | 177 | 3.3E-92 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 151 | 356 | 3.3E-92 | - |
| SMART | SM00220 | serkin_6 | 97 | 356 | 2.5E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 360 | 30.181049 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 218 | 230 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24740.1 | FUS3-complementing gene 2. a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins. | 0 |
| RefSeq | XP_004952979.1 | serine/threonine-protein kinase AFC2 [Setaria italica] | 0 |
| P51567 | Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana OX=3702 GN=AFC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0X989 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG329500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology