Basic Information
Locus ID:
gene-BS78_K222900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_43 | 381241 | 386035 | - | gene-BS78_K222900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 86,150.45 Da | 43.03 | 84.55 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 402 | 613 | 2.6E-40 | IPR001245 |
| Pfam | PF00139 | Legume lectin domain | 65 | 263 | 1.8E-6 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 379 | 687 | 2.56E-67 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 45 | 307 | 9.98E-9 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 382 | 484 | 2.1E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 485 | 693 | 4.3E-48 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 43 | 311 | 2.8E-12 | - |
| SMART | SM00220 | serkin_6 | 397 | 695 | 8.8E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 397 | 705 | 35.580238 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 35 | 6.0 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 533 | 545 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 751 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 734 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 759 | 780 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 717 | 787 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06740.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_025825271.1 | L-type lectin-domain containing receptor kinase IV.2-like [Panicum hallii] | 0 |
| Q9FG33 | Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana OX=3702 GN=LECRKS5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7CRW0 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G019500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH09.63 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0689160, gene-QOZ80_9BG0715160 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_K222900 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr0G006230 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G942000 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG077050, gene_TRIDC2BG084460 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS2B02G584100.1, TraesCS2D02G554400.1 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-53069, nbis-gene-53070, nbis-gene-56673 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g19250 |