Basic Information
Locus ID:
gene-BS78_K221400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_43 | 118799 | 121967 | + | gene-BS78_K221400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 88,373.20 Da | 40.30 | 83.40 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 85 | 274 | 3.02183E-112 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 98 | 253 | 4.2E-13 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 256 | 771 | 4.5E-233 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 75 | 285 | 1.01E-73 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 621 | 743 | 1.44E-38 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 341 | 596 | 1.37E-108 | IPR020568 |
| Gene3D | G3DSA:1.20.120.790 | - | 597 | 748 | 7.6E-63 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 73 | 300 | 1.6E-95 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 340 | 508 | 3.4E-85 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 509 | 596 | 4.7E-42 | - |
| SMART | SM00387 | HKATPase_4 | 98 | 237 | 1.0E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 50 | 779 | 1.3E-261 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 96 | 105 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 76 | 96 | 3.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 242 | 259 | 3.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 164 | 181 | 3.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 146 | 163 | 3.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 260 | 278 | 3.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 97 | 119 | 3.1E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 190 | 212 | 3.1E-83 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 73 | 744 | 27.212662 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 757 | 779 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 329 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_025825320.1 | heat shock protein 82 [Panicum hallii] | 0 |
| Q08277 | Heat shock protein 82 OS=Zea mays OX=4577 GN=HSP82 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2T8IAJ7 | HATPase_c domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_7G009900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology