Basic Information
Locus ID:
gene-BS78_K198400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_3833 | 16001 | 25514 | - | gene-BS78_K198400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 84,237.60 Da | 34.75 | 90.32 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 492 | 719 | 2.89293E-46 | - |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 345 | 431 | 3.2E-12 | IPR000535 |
| Pfam | PF00400 | WD domain, G-beta repeat | 651 | 688 | 3.3E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 565 | 602 | 0.22 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 525 | 557 | 0.056 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 39 | 288 | 5.4E-44 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 607 | 646 | 4.5E-7 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 320 | 3.24E-65 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 492 | 717 | 1.03E-53 | IPR036322 |
| SUPERFAMILY | SSF49354 | PapD-like | 340 | 433 | 1.02E-15 | IPR008962 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 150 | 343 | 2.8E-47 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 465 | 730 | 4.8E-77 | IPR015943 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 109 | 2.1E-22 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 344 | 464 | 1.3E-16 | IPR013783 |
| SMART | SM00320 | WD40_4 | 649 | 688 | 2.0E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 561 | 602 | 1.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 605 | 646 | 1.1E-8 | IPR001680 |
| SMART | SM00220 | serkin_6 | 37 | 323 | 3.0E-27 | IPR000719 |
| SMART | SM00320 | WD40_4 | 480 | 515 | 22.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 518 | 557 | 7.8E-5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 612 | 655 | 13.983944 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 327 | 35.73571 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 344 | 469 | 15.302483 | IPR000535 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 525 | 566 | 10.14085 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 612 | 648 | 10.838322 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 656 | 688 | 10.917412 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 569 | 611 | 11.343905 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 525 | 561 | 8.518333 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 569 | 605 | 9.124694 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 656 | 688 | 13.148488 | IPR001680 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 65 | - | IPR017441 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 633 | 647 | - | IPR019775 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 184 | 196 | - | IPR008271 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 544 | 558 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 544 | 558 | 9.4E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 633 | 647 | 9.4E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 675 | 689 | 9.4E-7 | IPR020472 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_044373850.1 | CBL-interacting serine/threonine-protein kinase 7-like [Triticum aestivum] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0A9BN88 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology