Basic Information
Locus ID:
gene-BS78_K184700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
ADP binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_355 | 119985 | 130119 | - | gene-BS78_K184700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 143,797.91 Da | 48.36 | 101.28 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14798 | RX-CC_like | 13 | 130 | 5.16583E-10 | IPR038005 |
| Pfam | PF18052 | Rx N-terminal domain | 13 | 93 | 7.3E-17 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 171 | 411 | 1.4E-41 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 154 | 424 | 3.04E-55 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 779 | 1109 | 1.02E-23 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1144 | 1253 | 1.93E-16 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 484 | 833 | 2.18E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 907 | 1139 | 4.3E-14 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 153 | 319 | 1.6E-33 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 523 | 767 | 9.5E-50 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1140 | 1277 | 8.6E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 326 | 409 | 5.4E-7 | IPR042197 |
| Gene3D | G3DSA:1.10.10.10 | - | 410 | 494 | 3.3E-11 | IPR036388 |
| Gene3D | G3DSA:1.20.5.4130 | - | 14 | 138 | 8.8E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 768 | 898 | 4.5E-16 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 776 | 796 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1190 | 1214 | 120.0 | IPR003591 |
| SMART | SM00367 | LRR_CC_2 | 702 | 729 | 43.0 | IPR006553 |
| SMART | SM00369 | LRR_typ_2 | 606 | 630 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 702 | 726 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 823 | 846 | 200.0 | IPR003591 |
| SMART | SM00367 | LRR_CC_2 | 1166 | 1193 | 9.6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 750 | 782 | 530.0 | IPR006553 |
| PRINTS | PR00364 | Disease resistance protein signature | 361 | 375 | 4.0E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 191 | 206 | 4.0E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 265 | 279 | 4.0E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 845 | 861 | 4.0E-17 | - |
| Coils | Coil | Coil | 39 | 59 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46730.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_021317837.1 | putative disease resistance protein RGA1 [Sorghum bicolor] | 0 |
| Q7XA40 | Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A811Q9M8 | Disease resistance protein RGA3 OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS39502 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology