Basic Information
Locus ID:
gene-BS78_K176600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_337 | 2430 | 6994 | + | gene-BS78_K176600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 90,563.55 Da | 51.04 | 80.84 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 490 | 729 | 4.0E-39 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 131 | 314 | 2.49E-13 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 471 | 796 | 1.73E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 578 | 810 | 7.2E-51 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 90 | 438 | 5.2E-18 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 465 | 577 | 1.1E-28 | - |
| SMART | SM00220 | serkin_6 | 489 | 798 | 2.4E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 489 | 798 | 38.195026 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 495 | 517 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 631 | 643 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 811 | 838 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 822 | 838 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_004972450.1 | serine/threonine-protein kinase-like protein CCR4 [Setaria italica] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7D2I6 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_6G008500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology