halophFGD

Basic Information

Locus ID: gene-BS78_K172100

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: Wall-associated receptor kinase galacturonan-binding

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold_3269	44782	45493	+	gene-BS78_K172100

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.71	18,630.97 Da	54.76	84.61	-0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13947	Wall-associated receptor kinase galacturonan-binding	43	102	5.2E-11	IPR025287

Gene Ontology

Molecular Function:

GO:0030247 (polysaccharide binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_022685276.1	wall-associated receptor kinase 2-like [Setaria italica]	0
TrEMBL	A0A368S8X9	Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_8G177800v2 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	4	AH04.2283, BH04.2243, CH03.2334, CH04.2670
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_9AG0692750, gene-QOZ80_9AG0692840 ... gene-QOZ80_9AG0692860, gene-QOZ80_9BG0718700, gene-QOZ80_9BG0718730
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.2HG0103900.1
Poaceae	Oryza coarctata	4	Oco08G001920, Oco08G001950, Oco18G001800, Oco21G009920
Poaceae	Oryza sativa	10	ChrSy.fgenesh.mRNA.14, LOC_Os04g14304.1, LOC_Os11g46860.1 ... LOC_Os11g46870.1, LOC_Os11g46880.1, LOC_Os11g46900.1, LOC_Os11g46950.1, LOC_Os11g47110.1, LOC_Os11g47140.1, LOC_Os11g47150.1
Poaceae	Paspalum vaginatum	17	gene-BS78_05G102300, gene-BS78_05G242700, gene-BS78_K099700 ... gene-BS78_05G266800, gene-BS78_05G269800, gene-BS78_05G271400, gene-BS78_05G272500, gene-BS78_05G272800, gene-BS78_K099900, gene-BS78_K100000, gene-BS78_K171900, gene-BS78_K172000, gene-BS78_K172100, gene-BS78_K196500, gene-BS78_K197800, gene-BS78_K219000, gene-BS78_K235400
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0205048, Pt_Chr0205049, Pt_Chr0205050
Poaceae	Sporobolus alterniflorus	3	Chr07G013790, Chr0G006760, Chr31G008600
Poaceae	Thinopyrum elongatum	1	Tel2E01G159400
Poaceae	Triticum dicoccoides	7	gene_TRIDC2AG008000, gene_TRIDC2AG008010 ... gene_TRIDC2AG008170, gene_TRIDC2BG005430, gene_TRIDC2BG009420, gene_TRIDC2BG009570, gene_TRIDC2BG009730
Poaceae	Triticum aestivum	8	TraesCS2A02G071800.1, TraesCS2A02G071900.1 ... TraesCS2B02G087300.1, TraesCS2B02G088100.1, TraesCS2D02G070600.1, TraesCS2D02G070700.1, TraesCS2D02G070800.1, TraesCSU02G009300.1
Poaceae	Zoysia japonica	3	nbis-gene-18470, nbis-gene-18479, nbis-gene-37655