Basic Information
Locus ID:
gene-BS78_K171200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
BTB-POZ and MATH domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_326 | 9810 | 10850 | + | gene-BS78_K171200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 38,138.59 Da | 37.67 | 91.62 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 20 | 134 | 0.00321465 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 167 | 275 | 1.3E-21 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 150 | 274 | 2.0E-26 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 149 | 278 | 7.9E-31 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 279 | 344 | 1.4E-9 | - |
| SMART | SM00225 | BTB_4 | 168 | 277 | 6.7E-23 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 168 | 235 | 18.099794 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039855205.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5V887 | BTB/POZ and MATH domain-containing protein 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017607 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0623030, gene-QOZ80_8BG0651030 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_07G089700, gene-BS78_K171200 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-51272, nbis-gene-891 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g22660, Zma_g22661 |