halophFGD

Basic Information

Locus ID: gene-BS78_K168200

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: meprin and TRAF homology

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold_320	129931	131338	+	gene-BS78_K168200

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.59	38,406.30 Da	38.54	88.59	-0.07

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	15	140	1.21026E-32	IPR002083
CDD	cd18280	BTB_POZ_BPM_plant	167	283	1.44261E-48	-
Pfam	PF00917	MATH domain	36	142	5.2E-7	IPR002083
Pfam	PF00651	BTB/POZ domain	172	284	1.9E-24	IPR000210
SUPERFAMILY	SSF49599	TRAF domain-like	11	150	3.6E-37	-
SUPERFAMILY	SSF54695	POZ domain	158	285	5.97E-31	IPR011333
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	157	280	1.1E-37	IPR011333
Gene3D	G3DSA:1.25.40.420	-	285	347	6.0E-13	-
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	14	144	3.5E-33	IPR008974
SMART	SM00225	BTB_4	181	286	1.3E-22	IPR000210
SMART	SM00061	math_3	19	123	1.8E-5	IPR002083
ProSiteProfiles	PS50097	BTB domain profile.	181	251	17.810247	IPR000210
ProSiteProfiles	PS50144	MATH/TRAF domain profile.	14	140	20.723345	IPR002083

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G19000.1	BTB-POZ and MATH domain 1.
RefSeq	XP_034601969.1	BTB/POZ and MATH domain-containing protein 1-like [Setaria viridis]
Swiss-Prot	Q8L765	BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1
TrEMBL	A0A4U6TMA1	Speckle-type POZ protein OS=Setaria viridis OX=4556 GN=SEVIR_7G045600v2 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	9	AH04.1998, BH01.2320, BH01.2327, BH01.2373, CH01.2421 ... CH04.2225, CH04.2361, CH07.478, Contig328.34
Poaceae	Eleusine coracana subsp. coracana	53	gene-QOZ80_2AG0108720, gene-QOZ80_2AG0111760 ... gene-QOZ80_2AG0124640, gene-QOZ80_2AG0124650, gene-QOZ80_2AG0124730, gene-QOZ80_2AG0124750, gene-QOZ80_2AG0124760, gene-QOZ80_2AG0124770, gene-QOZ80_2AG0124780, gene-QOZ80_2AG0124800, gene-QOZ80_2AG0124820, gene-QOZ80_2AG0124830, gene-QOZ80_2AG0124840, gene-QOZ80_2AG0124850, gene-QOZ80_2AG0125150, gene-QOZ80_2AG0125240, gene-QOZ80_2BG0162210, gene-QOZ80_2BG0180250, gene-QOZ80_2BG0180320, gene-QOZ80_2BG0180350, gene-QOZ80_2BG0180360, gene-QOZ80_2BG0180370, gene-QOZ80_2BG0180390, gene-QOZ80_2BG0180400, gene-QOZ80_2BG0180410, gene-QOZ80_2BG0180420, gene-QOZ80_2BG0180440, gene-QOZ80_2BG0180450, gene-QOZ80_2BG0180950, gene-QOZ80_3AG0208930, gene-QOZ80_3AG0208940, gene-QOZ80_3AG0237990, gene-QOZ80_3BG0254100, gene-QOZ80_3BG0280430, gene-QOZ80_4BG0330370, gene-QOZ80_6BG0470150, gene-QOZ80_6BG0470180, gene-QOZ80_6BG0470220, gene-QOZ80_8AG0629330, gene-QOZ80_8AG0629340, gene-QOZ80_8AG0629350, gene-QOZ80_8BG0657770, gene-QOZ80_8BG0657790, gene-QOZ80_8BG0657810, gene-QOZ80_9AG0689660, gene-QOZ80_9AG0689700, gene-QOZ80_9AG0689750, gene-QOZ80_9AG0689770, gene-QOZ80_9AG0692100, gene-QOZ80_9BG0714390, gene-QOZ80_9BG0714400, gene-QOZ80_9BG0714530, gene-QOZ80_9BG0714570
Poaceae	Hordeum vulgare	24	HORVU.MOREX.r3.1HG0040600.1.CDS1 ... HORVU.MOREX.r3.1HG0088550.1.CDS1, HORVU.MOREX.r3.3HG0241340.1.CDS1, HORVU.MOREX.r3.3HG0276420.1.CDS1, HORVU.MOREX.r3.3HG0298600.1.CDS1, HORVU.MOREX.r3.3HG0298640.1.CDS1, HORVU.MOREX.r3.3HG0319540.1.CDS1, HORVU.MOREX.r3.4HG0406030.1.CDS1, HORVU.MOREX.r3.4HG0407760.1.CDS1, HORVU.MOREX.r3.4HG0407800.1.CDS1, HORVU.MOREX.r3.4HG0414440.1.CDS1, HORVU.MOREX.r3.4HG0417220.1.CDS1, HORVU.MOREX.r3.5HG0478140.1.CDS1, HORVU.MOREX.r3.5HG0509590.1.CDS1, HORVU.MOREX.r3.5HG0509610.1.CDS1, HORVU.MOREX.r3.5HG0509630.1.CDS1, HORVU.MOREX.r3.5HG0509700.1.CDS1, HORVU.MOREX.r3.5HG0509710.1.CDS1, HORVU.MOREX.r3.6HG0625920.1.CDS1, HORVU.MOREX.r3.6HG0625930.1.CDS1, HORVU.MOREX.r3.6HG0625970.1.CDS1, HORVU.MOREX.r3.6HG0625980.1.CDS1, HORVU.MOREX.r3.7HG0643680.1.CDS1, HORVU.MOREX.r3.7HG0723180.1.CDS1
Poaceae	Lolium multiflorum	57	gene-QYE76_004888, gene-QYE76_006531, gene-QYE76_009381 ... gene-QYE76_009571, gene-QYE76_010164, gene-QYE76_010166, gene-QYE76_010170, gene-QYE76_010171, gene-QYE76_013921, gene-QYE76_016297, gene-QYE76_016298, gene-QYE76_020083, gene-QYE76_020909, gene-QYE76_023901, gene-QYE76_023902, gene-QYE76_023909, gene-QYE76_023911, gene-QYE76_026473, gene-QYE76_026504, gene-QYE76_026506, gene-QYE76_026507, gene-QYE76_026516, gene-QYE76_026520, gene-QYE76_026521, gene-QYE76_033732, gene-QYE76_033733, gene-QYE76_033771, gene-QYE76_033772, gene-QYE76_035236, gene-QYE76_035397, gene-QYE76_035466, gene-QYE76_036482, gene-QYE76_041217, gene-QYE76_041219, gene-QYE76_043929, gene-QYE76_048095, gene-QYE76_048096, gene-QYE76_051035, gene-QYE76_060416, gene-QYE76_061939, gene-QYE76_061940, gene-QYE76_061941, gene-QYE76_061942, gene-QYE76_061954, gene-QYE76_061956, gene-QYE76_062036, gene-QYE76_062040, gene-QYE76_062041, gene-QYE76_062042, gene-QYE76_062044, gene-QYE76_062045, gene-QYE76_063360, gene-QYE76_065858, gene-QYE76_065918, gene-QYE76_065919, gene-QYE76_065920, gene-QYE76_066062
Poaceae	Oryza coarctata	18	Oco07G006120, Oco07G006130, Oco08G006070, Oco15G011860 ... Oco19G004590, Oco19G004600, Oco19G004610, Oco19G004620, Oco19G004710, Oco19G006480, Oco20G004510, Oco20G004520, Oco20G006480, Oco21G002360, Oco21G008760, Oco22G009790, Oco22G009800, Oco22G010030
Poaceae	Oryza sativa	47	LOC_Os02g52316.1, LOC_Os04g35310.1, LOC_Os04g35340.1 ... LOC_Os04g35370.1, LOC_Os10g28760.1, LOC_Os10g28770.1, LOC_Os10g28780.1, LOC_Os10g28790.1, LOC_Os10g28810.1, LOC_Os10g28820.1, LOC_Os10g28840.1, LOC_Os10g28860.1, LOC_Os10g28975.1, LOC_Os10g29020.1, LOC_Os10g29050.1, LOC_Os10g29100.1, LOC_Os10g29110.1, LOC_Os10g29120.1, LOC_Os10g29150.1, LOC_Os10g29180.1, LOC_Os10g29190.1, LOC_Os10g29220.1, LOC_Os10g29230.1, LOC_Os10g29260.1, LOC_Os10g29290.1, LOC_Os10g29310.1, LOC_Os10g29320.1, LOC_Os10g29330.1, LOC_Os10g29340.1, LOC_Os10g29370.1, LOC_Os10g29380.1, LOC_Os10g29390.1, LOC_Os10g29440.1, LOC_Os10g29740.1, LOC_Os10g29750.1, LOC_Os10g29790.1, LOC_Os10g29810.1, LOC_Os10g29830.1, LOC_Os10g29840.1, LOC_Os10g29850.1, LOC_Os10g29920.1, LOC_Os10g29950.1, LOC_Os10g30040.1, LOC_Os10g30360.1, LOC_Os11g40490.1, LOC_Os11g40680.1, LOC_Os11g41250.1
Poaceae	Paspalum vaginatum	35	gene-BS78_01G166000, gene-BS78_01G231700, gene-BS78_K168100 ... gene-BS78_01G231800, gene-BS78_01G232000, gene-BS78_01G232100, gene-BS78_01G232200, gene-BS78_01G232500, gene-BS78_01G232600, gene-BS78_04G261300, gene-BS78_04G261400, gene-BS78_05G042800, gene-BS78_05G214300, gene-BS78_05G214400, gene-BS78_05G214700, gene-BS78_05G214800, gene-BS78_05G214900, gene-BS78_05G215000, gene-BS78_05G216400, gene-BS78_05G216600, gene-BS78_05G216800, gene-BS78_05G216900, gene-BS78_05G217000, gene-BS78_05G217200, gene-BS78_06G011900, gene-BS78_06G103800, gene-BS78_09G083000, gene-BS78_K168200, gene-BS78_K168300, gene-BS78_K168600, gene-BS78_K168700, gene-BS78_K168900, gene-BS78_K190100, gene-BS78_K222500, gene-BS78_K222600
Poaceae	Puccinellia tenuiflora	13	Pt_Chr0103299, Pt_Chr0107102, Pt_Chr0107631, Pt_Chr0206187 ... Pt_Chr0206217, Pt_Chr0400051, Pt_Chr0500066, Pt_Chr0600313, Pt_Chr0601246, Pt_Chr0601330, Pt_Chr0601331, Pt_Chr0702377, Pt_Chr0702378
Poaceae	Sporobolus alterniflorus	25	Chr06G014060, Chr06G014070, Chr07G014720, Chr07G015320 ... Chr09G009290, Chr09G009320, Chr09G009340, Chr09G009350, Chr09G009360, Chr09G009370, Chr09G009550, Chr12G005230, Chr13G015690, Chr13G015700, Chr13G015710, Chr15G014850, Chr15G014870, Chr16G013640, Chr17G013120, Chr20G006800, Chr25G007940, Chr25G011060, Chr25G017070, Chr27G009080, Chr29G006480
Poaceae	Thinopyrum elongatum	28	Tel1E01G480700, Tel1E01G492300, Tel1E01G584000 ... Tel3E01G009000, Tel3E01G216600, Tel3E01G216700, Tel3E01G216800, Tel3E01G612600, Tel3E01G781200, Tel3E01G890100, Tel4E01G503100, Tel4E01G517500, Tel5E01G607400, Tel5E01G607900, Tel5E01G608200, Tel5E01G608300, Tel5E01G608400, Tel5E01G608600, Tel5E01G608800, Tel5E01G608900, Tel5E01G609000, Tel6E01G655000, Tel6E01G655300, Tel6E01G655400, Tel6E01G655500, Tel7E01G666400, Tel7E01G779200, Tel7E01G779300
Poaceae	Triticum dicoccoides	36	gene_TRIDC1AG022050, gene_TRIDC1AG045220 ... gene_TRIDC1BG026440, gene_TRIDC1BG051120, gene_TRIDC1BG051130, gene_TRIDC1BG067720, gene_TRIDC3AG016110, gene_TRIDC3AG068550, gene_TRIDC3AG068560, gene_TRIDC3AG068570, gene_TRIDC3BG020910, gene_TRIDC3BG020920, gene_TRIDC3BG020930, gene_TRIDC3BG061660, gene_TRIDC3BG071780, gene_TRIDC3BG077550, gene_TRIDC3BG077560, gene_TRIDC3BG077570, gene_TRIDC4AG055510, gene_TRIDC5AG055790, gene_TRIDC5AG055840, gene_TRIDC5AG055850, gene_TRIDC5BG059830, gene_TRIDC5BG059850, gene_TRIDC5BG059870, gene_TRIDC5BG059880, gene_TRIDC6AG054940, gene_TRIDC6AG054960, gene_TRIDC6AG054970, gene_TRIDC6BG064310, gene_TRIDC6BG064320, gene_TRIDC6BG064330, gene_TRIDC6BG064350, gene_TRIDC7AG054770, gene_TRIDC7BG047500, gene_TRIDC7BG058040
Poaceae	Triticum aestivum	99	TraesCS1A02G144900.1, TraesCS1A02G303900.1.cds1 ... TraesCS1A02G359600.1.cds1, TraesCS1B02G162200.1.cds1, TraesCS1B02G306600.1.cds1, TraesCS1B02G306700.1, TraesCS1B02G314300.1, TraesCS1B02G314400.1.cds1, TraesCS1B02G375700.1, TraesCS1B02G375800.1.cds1, TraesCS1B02G412000.1.cds1, TraesCS1B02G428500.1.cds1, TraesCS1D02G096100.1.cds1, TraesCS1D02G293700.1.cds1, TraesCS1D02G303400.1, TraesCS1D02G407900.1.cds1, TraesCS2B02G542800.1.cds1, TraesCS3A02G128700.1.cds1, TraesCS3A02G384800.1, TraesCS3A02G384900.1.cds1, TraesCS3A02G385000.1.cds1, TraesCS3A02G385100.1.cds1, TraesCS3A02G486600.1.cds1, TraesCS3A02G486700.1.cds1, TraesCS3A02G486800.1, TraesCS3B02G147700.1.cds1, TraesCS3B02G147800.1.cds1, TraesCS3B02G416600.1, TraesCS3B02G416700.1.cds1, TraesCS3B02G416800.1.cds1, TraesCS3B02G416900.1.cds1, TraesCS3B02G417000.1.cds1, TraesCS3B02G417100.1.cds1, TraesCS3B02G417200.1.cds1, TraesCS3B02G417300.1.cds1, TraesCS3B02G489300.1.cds1, TraesCS3B02G489400.1.cds1, TraesCS3B02G534600.1.cds1, TraesCS3B02G534700.1.cds1, TraesCS3B02G534800.1.cds1, TraesCS3D02G103600.1, TraesCS3D02G129600.1, TraesCS3D02G377600.1.cds1, TraesCS3D02G377700.1.cds1, TraesCS3D02G377800.1.cds1, TraesCS3D02G377900.1.cds1, TraesCS3D02G378000.1.cds1, TraesCS3D02G378100.1.cds1, TraesCS3D02G482000.1.cds1, TraesCS3D02G482100.1.cds1, TraesCS3D02G482200.1, TraesCS4A02G411800.1.cds1, TraesCS4A02G425600.1.cds1, TraesCS4A02G425700.1.cds1, TraesCS4B02G312000.1, TraesCS4D02G300300.1.cds1, TraesCS4D02G309600.1.cds1, TraesCS5A02G047600.1.cds1, TraesCS5A02G381300.1.cds1, TraesCS5A02G381500.1.cds1, TraesCS5A02G382000.1, TraesCS5A02G382200.1.cds1, TraesCS5A02G476000.1, TraesCS5B02G385500.1.cds1, TraesCS5B02G385600.1.cds1, TraesCS5B02G385700.1.cds1, TraesCS5B02G385800.2.cds1, TraesCS5B02G385900.1.cds1, TraesCS5B02G386100.1.cds1, TraesCS5B02G386200.1.cds1, TraesCS5D02G391300.1.cds1, TraesCS5D02G391400.1, TraesCS5D02G391500.1.cds1, TraesCS6A02G014200.1, TraesCS6A02G367400.1.cds1, TraesCS6A02G367700.1.cds1, TraesCS6A02G367900.1.cds1, TraesCS6B02G402700.1.cds1, TraesCS6B02G403600.1, TraesCS6B02G403700.1.cds1, TraesCS6D02G350400.1.cds1, TraesCS6D02G350500.1.cds1, TraesCS6D02G350700.1.cds1, TraesCS6D02G350900.1.cds1, TraesCS6D02G351000.2.cds1, TraesCS6D02G351100.1.cds1, TraesCS6D02G351200.1.cds1, TraesCS7A02G212600.1.cds1, TraesCS7A02G337600.1.cds1, TraesCS7A02G394200.1.cds1, TraesCS7B02G119400.1.cds1, TraesCS7B02G296200.1.cds1, TraesCS7B02G361600.1, TraesCS7D02G214400.1.cds1, TraesCS7D02G389600.1.cds1, TraesCS7D02G448300.1.cds1, TraesCS7D02G448400.1, TraesCSU02G055300.1.cds1, TraesCSU02G085200.1.cds1
Poaceae	Zea mays	6	Zm00001eb047620_P001, Zm00001eb047910_P001 ... Zm00001eb049070_P001, Zm00001eb050730_P001, Zm00001eb065610_P001, Zm00001eb222950_P001
Poaceae	Zoysia japonica	17	nbis-gene-27987, nbis-gene-27992, nbis-gene-27994 ... nbis-gene-27997, nbis-gene-27999, nbis-gene-47992, nbis-gene-47993, nbis-gene-47996, nbis-gene-48012, nbis-gene-48015, nbis-gene-48016, nbis-gene-5110, nbis-gene-57370, nbis-gene-58268, nbis-gene-58939, nbis-gene-58951, nbis-gene-59124
Poaceae	Zoysia macrostachya	8	Zma_g13261, Zma_g13262, Zma_g13263, Zma_g13264, Zma_g16055 ... Zma_g16056, Zma_g16075, Zma_g24029