Basic Information
Locus ID:
gene-BS78_K167500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_320 | 13695 | 16785 | + | gene-BS78_K167500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 81,651.44 Da | 37.94 | 83.93 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 24 | 213 | 4.68223E-110 | - |
| Pfam | PF00183 | Hsp90 protein | 195 | 709 | 7.7E-234 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 37 | 192 | 1.0E-12 | IPR003594 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 14 | 224 | 2.58E-73 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 280 | 535 | 1.14E-108 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 559 | 681 | 1.24E-38 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 279 | 447 | 2.9E-85 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 12 | 239 | 9.4E-95 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 448 | 534 | 4.2E-42 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 535 | 686 | 1.3E-63 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 37 | 176 | 3.4E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 2 | 717 | 1.2E-260 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 35 | 44 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 199 | 217 | 1.1E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 36 | 58 | 1.1E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 129 | 151 | 1.1E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 15 | 35 | 1.1E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 103 | 120 | 1.1E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 181 | 198 | 1.1E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 85 | 102 | 1.1E-82 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 12 | 682 | 27.146103 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 695 | 717 | - | - |
| Coils | Coil | Coil | 534 | 554 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_025825320.1 | heat shock protein 82 [Panicum hallii] | 0 |
| Q08277 | Heat shock protein 82 OS=Zea mays OX=4577 GN=HSP82 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2T8IAJ7 | HATPase_c domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_7G009900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology