Basic Information
Locus ID:
gene-BS78_K141300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_278 | 132590 | 137537 | + | gene-BS78_K141300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 44,032.73 Da | 32.62 | 91.86 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 86 | 348 | 2.1E-82 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 85 | 335 | 9.91E-42 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 112 | 409 | 2.2E-92 | IPR027417 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 27 | 5.0 | - |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 277 | 353 | 16.661104 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 113 | 271 | 30.717522 | IPR020588 |
| PRINTS | PR00142 | RecA protein signature | 290 | 318 | 9.0E-47 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 324 | 353 | 9.0E-47 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 242 | 271 | 9.0E-47 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 377 | 394 | 9.0E-47 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 171 | 200 | 9.0E-47 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 204 | 233 | 9.0E-47 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_025816104.1 | DNA repair protein recA homolog 2, mitochondrial [Panicum hallii] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7DBZ1 | Uncharacterized protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_5G021800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology