halophFGD

Basic Information

Locus ID: gene-BS78_K099900

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: Wall-associated receptor kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold_192	150995	154071	-	gene-BS78_K099900

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.73	64,160.90 Da	31.22	74.11	-0.12

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00054	EGF_CA	317	351	1.20904E-5	-
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	426	577	8.3E-28	IPR001245
Pfam	PF13947	Wall-associated receptor kinase galacturonan-binding	34	95	2.1E-9	IPR025287
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	408	595	8.63E-43	IPR011009
SUPERFAMILY	SSF57196	EGF/Laminin	317	352	1.58E-6	-
Gene3D	G3DSA:2.10.25.10	Laminin	274	321	4.3E-5	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	423	504	1.2E-18	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	505	596	4.9E-21	-
Gene3D	G3DSA:2.10.25.10	Laminin	322	360	6.0E-7	-
SMART	SM00181	egf_5	320	360	0.82	IPR000742
SMART	SM00181	egf_5	262	316	6.3	IPR000742
SMART	SM00220	serkin_6	422	593	2.4E-7	IPR000719
SMART	SM00179	egfca_6	317	360	1.0E-6	IPR001881
ProSiteProfiles	PS50011	Protein kinase domain profile.	422	596	24.993872	IPR000719
ProSiteProfiles	PS50026	EGF-like domain profile.	317	360	13.268866	IPR000742
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	428	452	-	IPR017441
ProSitePatterns	PS00010	Aspartic acid and asparagine hydroxylation site.	334	345	-	IPR000152
ProSitePatterns	PS01187	Calcium-binding EGF-like domain signature.	317	343	-	IPR018097

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005509 (calcium ion binding) GO:0005524 (ATP binding) GO:0030247 (polysaccharide binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G21270.1	wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.
RefSeq	XP_034607093.1	wall-associated receptor kinase 4-like [Setaria viridis]
Swiss-Prot	Q9LMP1	Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1
TrEMBL	A0A4U6TLZ9	Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G189100v2 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	4	AH04.2283, BH04.2243, CH03.2334, CH04.2670
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_9AG0692750, gene-QOZ80_9AG0692840 ... gene-QOZ80_9AG0692860, gene-QOZ80_9BG0718700, gene-QOZ80_9BG0718730
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.2HG0103900.1
Poaceae	Oryza coarctata	4	Oco08G001920, Oco08G001950, Oco18G001800, Oco21G009920
Poaceae	Oryza sativa	10	ChrSy.fgenesh.mRNA.14, LOC_Os04g14304.1, LOC_Os11g46860.1 ... LOC_Os11g46870.1, LOC_Os11g46880.1, LOC_Os11g46900.1, LOC_Os11g46950.1, LOC_Os11g47110.1, LOC_Os11g47140.1, LOC_Os11g47150.1
Poaceae	Paspalum vaginatum	17	gene-BS78_05G102300, gene-BS78_05G242700, gene-BS78_K099700 ... gene-BS78_05G266800, gene-BS78_05G269800, gene-BS78_05G271400, gene-BS78_05G272500, gene-BS78_05G272800, gene-BS78_K099900, gene-BS78_K100000, gene-BS78_K171900, gene-BS78_K172000, gene-BS78_K172100, gene-BS78_K196500, gene-BS78_K197800, gene-BS78_K219000, gene-BS78_K235400
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0205048, Pt_Chr0205049, Pt_Chr0205050
Poaceae	Sporobolus alterniflorus	3	Chr07G013790, Chr0G006760, Chr31G008600
Poaceae	Thinopyrum elongatum	1	Tel2E01G159400
Poaceae	Triticum dicoccoides	7	gene_TRIDC2AG008000, gene_TRIDC2AG008010 ... gene_TRIDC2AG008170, gene_TRIDC2BG005430, gene_TRIDC2BG009420, gene_TRIDC2BG009570, gene_TRIDC2BG009730
Poaceae	Triticum aestivum	8	TraesCS2A02G071800.1, TraesCS2A02G071900.1 ... TraesCS2B02G087300.1, TraesCS2B02G088100.1, TraesCS2D02G070600.1, TraesCS2D02G070700.1, TraesCS2D02G070800.1, TraesCSU02G009300.1
Poaceae	Zoysia japonica	3	nbis-gene-18470, nbis-gene-18479, nbis-gene-37655