Basic Information
Locus ID:
gene-BS78_K088200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase SD2-5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_172 | 103904 | 106294 | - | gene-BS78_K088200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 72,097.13 Da | 45.36 | 76.93 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09218 | TLP-PA | 27 | 235 | 5.21934E-86 | - |
| CDD | cd14066 | STKc_IRAK | 351 | 617 | 1.78782E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 348 | 613 | 2.5E-51 | IPR000719 |
| Pfam | PF00314 | Thaumatin family | 32 | 236 | 8.1E-62 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 26 | 236 | 1.12E-82 | IPR037176 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 329 | 616 | 1.29E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 308 | 418 | 1.0E-28 | - |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 26 | 236 | 2.8E-81 | IPR037176 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 419 | 632 | 1.8E-59 | - |
| SMART | SM00205 | tha2 | 28 | 236 | 1.2E-117 | IPR001938 |
| SMART | SM00220 | serkin_6 | 345 | 615 | 3.1E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 345 | 625 | 39.961777 | IPR000719 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 25 | 236 | 48.292221 | IPR001938 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 466 | 478 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 351 | 372 | - | IPR017441 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 82 | 97 | - | IPR017949 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 69 | 80 | 5.4E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 27 | 39 | 5.4E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 47 | 56 | 5.4E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 119 | 135 | 5.4E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 226 | 235 | 5.4E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 82 | 111 | 5.4E-42 | IPR001938 |
| Coils | Coil | Coil | 566 | 586 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38280.1 | PR5-like receptor kinase. putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase | 0 |
| RefSeq | XP_004968008.1 | proline-rich receptor-like protein kinase PERK3 [Setaria italica] | 0 |
| Q9FF29 | PR5-like receptor kinase OS=Arabidopsis thaliana OX=3702 GN=PR5K PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6PBY9 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PMPSC052026 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology