halophFGD

Basic Information

Locus ID: gene-BS78_K043500

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold_132	8491	17629	+	gene-BS78_K043500

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.59	29,862.11 Da	58.75	83.14	-0.56

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	2	199	2.0E-30	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	1	201	2.4E-48	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	237	4.9E-51	-
SMART	SM00220	serkin_6	2	205	4.7E-7	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	205	27.820671	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	55	67	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G65800.1	receptor kinase 2. encodes a putative receptor-like serine/threonine protein kinases that is similar to brassica self-incompatibility (S) locus. expressed in specifically in cotyledons, leaves, and sepals, in correlation with the maturation of these structures.
RefSeq	XP_037471210.1	uncharacterized protein LOC119345089 [Triticum dicoccoides]
Swiss-Prot	Q9S972	Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana OX=3702 GN=SD16 PE=1 SV=2
TrEMBL	A0A8T0T8T7	Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG211996 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	AH06.2071, CH06.2106
Poaceae	Paspalum vaginatum	2	gene-BS78_05G222400, gene-BS78_K043500