Basic Information
Locus ID:
gene-BS78_K028700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_118 | 273975 | 277069 | - | gene-BS78_K028700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 69,889.79 Da | 36.40 | 91.31 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 363 | 629 | 5.00907E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 358 | 630 | 2.7E-44 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 30 | 88 | 4.5E-8 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 632 | 2.16E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 433 | 649 | 7.5E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 327 | 432 | 1.9E-30 | - |
| SMART | SM00220 | serkin_6 | 357 | 635 | 5.5E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 635 | 36.809895 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 480 | 492 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 363 | 385 | - | IPR017441 |
| Coils | Coil | Coil | 317 | 337 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02070.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_004962492.1 | wall-associated receptor kinase-like 20 [Setaria italica] | 0 |
| Q9LZM4 | Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana OX=3702 GN=WAKL20 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5V5Y3 | Wall-associated receptor kinase-like 20 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0018470 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg3340, jg34, jg9966, jg9967, jg9969, jg9970 |
| Aizoaceae | Mesembryanthemum crystallinum | 4 | gene_15429, gene_15430, gene_15431, gene_16530 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah002507, Ah035180 |
| Amaranthaceae | Beta vulgaris | 4 | BVRB_2g025480, BVRB_5g111240, BVRB_6g141030, BVRB_6g146210 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg22550 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg16435 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00016359 |
| Amaranthaceae | Suaeda glauca | 6 | Sgl54093, Sgl54095, Sgl59426, Sgl59428, Sgl62534, Sgl67078 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000018234, gene:ENSEOMG00000018640 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.1BG0018810, CQ.Regalona.r1.2AG0020570 ... |
| Anacardiaceae | Pistacia vera | 3 | pistato.v30175910, pistato.v30274270, pistato.v30284530 |
| Apiaceae | Apium graveolens | 2 | Ag2G02460, Ag5G01623 |
| Arecaceae | Cocos nucifera | 2 | COCNU_16G008350, scaffold008473G000010 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103710205, gene-LOC103716779 |
| Asteraceae | Flaveria trinervia | 4 | Ftri17G00869, Ftri17G20954, Ftri17G21313, Ftri6G27880 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G53840.1, AT5G02070.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10011109m.g.v1.0, Thhalv10012908m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g40360.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g057930.2N, BniB08g068250.2N |
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq02G1162, Ceq02G1530, Ceq08G1117 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl02G1203, Cgl02G1584, Cgl08G1143 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g17380 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g34440 |
| Nitrariaceae | Nitraria sibirica | 3 | evm.TU.LG01.1153, evm.TU.LG01.2180, evm.TU.LG02.1780 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00002862, Pov_00006426, Pov_00038775 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb0G37049, Lb7G34815 |
| Poaceae | Echinochloa crus-galli | 3 | AH06.2205, BH06.2022, CH06.2237 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0402600, gene-QOZ80_5BG0451100 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0240070.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_010690 |
| Poaceae | Oryza coarctata | 1 | Oco09G005850 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g25390.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_09G113700, gene-BS78_K028700 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr01G022650, Chr12G014310 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G210100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG015240, gene_TRIDC3BG019800 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G122300.1, TraesCS3B02G141500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb177830_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-27619 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g19399 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG05.933, evm.TU.LG25.404 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g38380 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.363 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-14052, nbisL1-mrna-6113 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12529 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-14207 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000005l.132 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00010178 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-472 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-19572 |
| Salicaceae | Populus euphratica | 3 | populus_peu06471, populus_peu11343, populus_peu11607 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132604025, gene-LOC132629957, gene-LOC132630363 |
| Solanaceae | Solanum chilense | 3 | SOLCI004068200, SOLCI004436900, SOLCI006288800 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107006010, gene-LOC107030767, gene-LOC107031187 |
| Tamaricaceae | Reaumuria soongarica | 4 | gene_10659, gene_7635, gene_7636, gene_7637 |
| Tamaricaceae | Tamarix chinensis | 3 | TC07G0415, TC07G0417, TC08G0871 |
| Zosteraceae | Zostera marina | 2 | Zosma02g12720.v3.1, Zosma02g12870.v3.1 |