Basic Information
Locus ID:
gene-BS78_10G279900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 44484452 | 44489170 | - | gene-BS78_10G279900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 109,012.95 Da | 45.71 | 98.66 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 56 | 102 | 7.2E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 740 | 1018 | 2.8E-39 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 157 | 172 | 0.19 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 576 | 633 | 3.3E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 137 | 471 | 7.14E-64 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 405 | 662 | 2.89E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 734 | 1020 | 6.7E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 272 | 372 | 2.6E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 376 | 672 | 5.9E-87 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 55 | 177 | 1.1E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 271 | 1.7E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 815 | 1031 | 2.4E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 711 | 814 | 6.0E-22 | - |
| SMART | SM00369 | LRR_typ_2 | 381 | 405 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 406 | 429 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 572 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 236 | 260 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 309 | 333 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 524 | 547 | 160.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 738 | 1020 | 3.2E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 620 | 643 | 99.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 357 | 380 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 154 | 173 | 23.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 738 | 1021 | 36.145599 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 859 | 871 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 620 | 633 | 7.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 157 | 170 | 7.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_004966471.1 | leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 [Setaria italica] | 0 |
| P0DL10 | Leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 OS=Zea mays OX=4577 GN=TD1 PE=2 SV=1 | 0 | |
| TrEMBL | K3XV02 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101763793 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology