Basic Information
Locus ID:
gene-BS78_10G275800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 44220267 | 44224303 | - | gene-BS78_10G275800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.23 | 52,984.94 Da | 46.66 | 80.47 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 32 | 78 | 5.63E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 29 | 69 | 2.0E-6 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 141 | 342 | 2.0E-18 | IPR017451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02030.1 | F-box family protein. | 0 |
| RefSeq | XP_039804531.1 | putative F-box protein At2g02030 isoform X7 [Panicum virgatum] | 0 |
| Q9ZPS1 | Putative F-box protein At2g02030 OS=Arabidopsis thaliana OX=3702 GN=At2g02030 PE=4 SV=1 | 0 | |
| TrEMBL | A0A8T0TH60 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG332600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology