Basic Information
Locus ID:
gene-BS78_10G272200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 43949075 | 43950361 | - | gene-BS78_10G272200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.79 | 43,764.31 Da | 51.91 | 97.48 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 126 | 171 | 4.4E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 2.2E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 390 | 1.02E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 90 | 376 | 6.7E-50 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 428 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_004965417.1 | probable LRR receptor-like serine/threonine-protein kinase At4g20940 [Setaria italica] | 0 |
| TrEMBL | A0A1E5W9Y3 | LRRNT_2 domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0004919 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology