Basic Information
Locus ID:
gene-BS78_10G242900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 41208067 | 41212974 | + | gene-BS78_10G242900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 63,487.23 Da | 51.69 | 100.03 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 242 | 509 | 2.7E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 225 | 512 | 2.56E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 212 | 313 | 6.9E-26 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 17 | 132 | 3.4E-15 | IPR036537 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 314 | 518 | 3.0E-55 | - |
| SMART | SM00220 | serkin_6 | 241 | 517 | 5.5E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 241 | 517 | 34.802868 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 247 | 269 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 359 | 371 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 543 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_034592377.1 | cysteine-rich receptor-like protein kinase 19 [Setaria viridis] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A4U6V1P3 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_4G263000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology