Basic Information
Locus ID:
gene-BS78_10G222800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 39323498 | 39324838 | - | gene-BS78_10G222800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 38,782.11 Da | 30.65 | 91.01 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 20 | 146 | 2.46199E-8 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 171 | 285 | 1.01874E-54 | - |
| Pfam | PF00651 | BTB/POZ domain | 176 | 286 | 5.8E-25 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 167 | 286 | 5.89E-32 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 13 | 151 | 3.6E-9 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 18 | 150 | 2.1E-6 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 288 | 355 | 1.3E-17 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 161 | 282 | 5.7E-39 | IPR011333 |
| SMART | SM00225 | BTB_4 | 185 | 288 | 1.2E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 185 | 252 | 17.21047 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037462391.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TB17 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_41894 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology